RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ZNF600Q6ZNG1 722 aa9.82□□□□□ -0.84
NUDCD3-201ENST00000338427 RRNAD1Q96FB5 475 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-201ENST00000338427 MRPS26Q9BYN8 205 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-201ENST00000338427 CSTL1Q9H114 145 aa9.82□□□□□ -0.84
NUDCD3-201ENST00000338427 MS4A6AQ9H2W1 248 aa9.82□□□□□ -0.84
NUDCD3-201ENST00000338427 VSIRQ9H7M9 311 aa9.82□□□□□ -0.84
NUDCD3-201ENST00000338427 GPR132Q9UNW8 380 aa9.82□□□□□ -0.84
NUDCD3-201ENST00000338427 TP53TG1Q9Y2A0 90 aa9.82□□□□□ -0.84
NUDCD3-201ENST00000338427 AGRNO00468 2067 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 KIR2DL5BA0A0G2JN68 375 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 KIR2DL5BA0A0G2JPC4 375 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 INS-IGF2F8WCM5 200 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 DEFB4AO15263 64 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 CDS2O95674 445 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 DEFB131AP59861 70 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 RBMS2Q15434 407 aaKnown RBP9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 KIR2DL5AQ8N109 375 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 CCDC71LQ8N9Z2 235 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 OR4C16Q8NGL9 310 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 RNASE11Q8TAA1 199 aaKnown RBP9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 TMEM170AQ8WVE7 144 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 DIRAS2Q96HU8 199 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 PDCD10Q9BUL8 212 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 TMEM222Q9H0R3 208 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 NAA60Q9H7X0 242 aa9.81□□□□□ -0.84
NUDCD3-201ENST00000338427 KMT2AQ03164 3969 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 DNASE2O00115 360 aaPredicted RBP9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 CLN5O75503 358 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 LY6G6CO95867 125 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 TBPP20226 339 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 OPRK1P41145 380 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 SUB1P53999 127 aaKnown RBP eCLIP9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 IL18Q14116 193 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 TMEM268Q5VZI3 342 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 CEMP1Q6PRD7 247 aaPredicted RBP9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 OR51S1Q8NGJ8 323 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 DYNC2LI1Q8TCX1 351 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 TMEM230Q96A57 120 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 ENY2Q9NPA8 101 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 CACNG5Q9UF02 275 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 DNAH10Q8IVF4 4471 aa9.8□□□□□ -0.84
NUDCD3-201ENST00000338427 MPTX1A8MV57 137 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 DISC1C4P0D8 188 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 ATG12O94817 140 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 NPPCP23582 126 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 SPCS3P61009 180 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 BSXQ3C1V8 233 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 GSG1LQ6UXU4 331 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 OR4X1Q8NH49 305 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 C15orf40Q8WUR7 153 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 SMIM4Q8WVI0 70 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 LINC00476Q8WZB0 136 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 RARRES2Q99969 163 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 GINS3Q9BRX5 216 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 HEYLQ9NQ87 328 aaPredicted RBP9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 RABAC1Q9UI14 185 aa9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 C14orf166Q9Y224 244 aaKnown RBP9.79□□□□□ -0.84
NUDCD3-201ENST00000338427 VPS13DQ5THJ4 4388 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 CRYM-AS1A6NIL9 109 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 KNCNA6PVL3 124 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 CEBPZOSA8MTT3 80 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 AKAIN1P0CW23 69 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 RPL5P46777 297 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 CMC4P56277 68 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 PAFAH1B2P68402 229 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 TMEM187Q14656 261 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 PRSS54Q6PEW0 395 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 OR11H2Q8NH07 326 aa9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 RBPMSQ93062 196 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-201ENST00000338427 ANKRD20A5PA0PJZ0 165 aa9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 CRYBB3P26998 211 aa9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 TNFSF8P32971 234 aa9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 DHODHQ02127 395 aa9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 SSBP1Q04837 148 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 AARDQ4LEZ3 155 aa9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 STXBP6Q8NFX7 210 aa9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 OR52E5Q8NH55 327 aa9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 PHLDA1Q8WV24 401 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 SOSTQ9BQB4 213 aa9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 C6orf62Q9GZU0 229 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-201ENST00000338427 K7EQG2 157 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 CTDSPLO15194 276 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 CA1P00915 261 aaPredicted RBP9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 ZNF688P0C7X2 276 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 AKR1C4P17516 323 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 HTR2BP41595 481 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 P2RY1P47900 373 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 RND2P52198 227 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 MRPS10P82664 201 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 LYZL2Q7Z4W2 148 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 NPIPB3Q92617 1050 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 TMEM56-RWDD3S4R434 201 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 U3KQE9 123 aa9.76□□□□□ -0.85
NUDCD3-201ENST00000338427 CORTO00230 105 aa9.75□□□□□ -0.85
NUDCD3-201ENST00000338427 IGLC1P0CG04 106 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms