RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 TEX45Q8NA69 505 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 RASL10BQ96S79 203 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 GAGE1Q13065 139 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 ATRAIDQ6UW56 229 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 IDI2-AS1Q9NZ38 188 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 MGAMO43451 1857 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 CD28P10747 220 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 ZP4Q12836 540 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 ZIC1Q15915 447 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 ACTL10Q5JWF8 245 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 OR9G1Q8NH87 305 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 COL18A1P39060 1754 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 TRBV24-1A0A075B6N3 115 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 CGAP01215 116 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 PF4V1P10720 104 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 HCSTQ9UBK5 93 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 RPL23P62829 140 aaKnown RBP5.25□□□□□ -1.57
CSMD1-201ENST00000335551 ZNF362Q5T0B9 420 aaPredicted RBP5.25□□□□□ -1.57
CSMD1-201ENST00000335551 TSKUQ8WUA8 353 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 UBE2WQ96B02 151 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 A0A1W2PRE2 83 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 PCSK4Q6UW60 755 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 DUX3Q96PT4 197 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 TMEM229AB2RXF0 380 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 F8W1H4 67 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 CT62P0C5K7 136 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 LIMS1P48059 325 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 GTF3AQ92664 365 aaKnown RBP5.24□□□□□ -1.57
CSMD1-201ENST00000335551 CLEC7AQ9BXN2 247 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 REG1AP05451 166 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 SIRT4Q9Y6E7 314 aaPredicted RBP5.24□□□□□ -1.57
CSMD1-201ENST00000335551 TMEM171Q8WVE6 324 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 FOXD3Q9UJU5 478 aaPredicted RBP5.24□□□□□ -1.57
CSMD1-201ENST00000335551 LTBP4Q8N2S1 1624 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 C16orf97H3BN30 126 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 TBX6O95947 436 aaPredicted RBP5.24□□□□□ -1.57
CSMD1-201ENST00000335551 CD160O95971 181 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 TFF3Q07654 80 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 GUSBP1Q15486 140 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 LINC01555Q8NAE3 123 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 RBMY1FQ15415 496 aaKnown RBP5.24□□□□□ -1.57
CSMD1-201ENST00000335551 IFI27L2Q9H2X8 130 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 WDR87Q6ZQQ6 2873 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 CD69Q07108 199 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 Q5BKY6 102 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 ZPLD1Q8TCW7 415 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 GPBAR1Q8TDU6 330 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 J3QW42 95 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 DUTP33316 252 aaKnown RBP5.24□□□□□ -1.57
CSMD1-201ENST00000335551 SPINK14Q6IE38 97 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 TET2Q6N021 2002 aaPredicted RBP5.24□□□□□ -1.57
CSMD1-201ENST00000335551 ZNHIT1O43257 154 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 CD5LO43866 347 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 FOXL1Q12952 345 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 VN1R4Q7Z5H5 301 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 RTN4RL2Q86UN3 420 aa5.24□□□□□ -1.57
CSMD1-201ENST00000335551 TRAV1-1A0A0B4J248 108 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 EREGO14944 169 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 PF4P02776 101 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 RNASE7Q9H1E1 156 aaKnown RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 IGHV5-51A0A0C4DH38 117 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 C21orf140B9A014 251 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 H3BTX0 84 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 CTGFP29279 349 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 OSR1Q8TAX0 266 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 MESP2Q0VG99 397 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 TLN2Q9Y4G6 2542 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 TDGF1P3P51864 188 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 RFLNBQ8N5W9 214 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 NUP210Q8TEM1 1887 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 IGHMP01871 453 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 PRSS41Q7RTY9 318 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 ZNF784Q8NCA9 323 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 CCL13Q99616 98 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 ZNF703Q9H7S9 590 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 HOXB3P14651 431 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 TIMP3P35625 211 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 GATD1Q8NB37 220 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 SLC50A1Q9BRV3 221 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 GZMMP51124 257 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 PMS2CLQ68D20 193 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 LINC01465Q8N7H1 131 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 IGHV1OR21-1A0A087WYE8 117 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 DXOO77932 396 aaKnown RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 PSG3Q16557 428 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 DTX2Q86UW9 622 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 RPRMLQ8N4K4 120 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 TPRX1Q8N7U7 411 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 IGKV1D-42A0A075B6H8 117 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 RPL32P62910 135 aaKnown RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 EGR4Q05215 589 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 UTF1Q5T230 341 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 NPIPB3Q92617 1050 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 NPIPB13A6NJU9 1138 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 NDUFS6O75380 124 aaKnown RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 IFI6P09912 130 aa5.23□□□□□ -1.57
CSMD1-201ENST00000335551 MRPL27Q9P0M9 148 aaKnown RBP5.23□□□□□ -1.57
CSMD1-201ENST00000335551 A0A087X0K7 114 aa5.22□□□□□ -1.57
CSMD1-201ENST00000335551 MUC21A0A0G2JKD1 596 aa5.22□□□□□ -1.57
CSMD1-201ENST00000335551 MUC21A0A140T8X8 626 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms