RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 ADTRPQ96IZ2 230 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 HARBI1Q96MB7 349 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 SLC25A2Q9BXI2 301 aa9.99□□□□□ -0.81
VPS33B-201ENST00000333371 MRPL36Q9P0J6 103 aaKnown RBP9.99□□□□□ -0.81
VPS33B-201ENST00000333371 TBL2Q9Y4P3 447 aaKnown RBP9.99□□□□□ -0.81
VPS33B-201ENST00000333371 REG1AP05451 166 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 OR5G3P0C626 314 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 CEACAM8P31997 349 aaPredicted RBP9.98□□□□□ -0.81
VPS33B-201ENST00000333371 RANP62826 216 aaKnown RBP9.98□□□□□ -0.81
VPS33B-201ENST00000333371 CD69Q07108 199 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 CORO2AQ92828 525 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 FAM167A-AS1Q96KT0 104 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 GNB1LQ9BYB4 327 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 CHODLQ9H9P2 273 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 LY96Q9Y6Y9 160 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 MALRD1Q5VYJ5 2156 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 APELAP0DMC3 54 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 ESDP10768 282 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 SELENOVP59797 346 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 UBE2L3P68036 154 aaKnown RBP9.98□□□□□ -0.81
VPS33B-201ENST00000333371 PRB3Q04118 309 aaPredicted RBP9.98□□□□□ -0.81
VPS33B-201ENST00000333371 IGF2BP2-AS1Q96M15 143 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 FNDC4Q9H6D8 234 aaPredicted RBP9.98□□□□□ -0.81
VPS33B-201ENST00000333371 SH3BGRL2Q9UJC5 107 aa9.98□□□□□ -0.81
VPS33B-201ENST00000333371 TRAV9-1A0A075B6T8 112 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 BMPR1BO00238 502 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 GPX1P07203 203 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 C8orf88P0DMB2 117 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 ZNF25P17030 456 aaPredicted RBP9.97□□□□□ -0.81
VPS33B-201ENST00000333371 GATA4P43694 442 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 AMTP48728 403 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 Q0VG73 95 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 C2orf83Q53S99 150 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 C19orf35Q6ZS72 473 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 SIGLECL1Q8N7X8 197 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 Q8N976 141 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 SLC35E1Q96K37 410 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 VAMP8Q9BV40 100 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 ZNF257Q9Y2Q1 563 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 SVEP1Q4LDE5 3571 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 ZNF253O75346 499 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 DLX1P56177 255 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 WT1-ASQ06250 92 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 PRR27Q6MZM9 219 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 COMMD5Q9GZQ3 224 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 CDC42EP3Q9UKI2 254 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 PPIAL4AQ9Y536 164 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 A0A1W2PS18 150 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 PSMB11A5LHX3 300 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 CGB1A6NKQ9 187 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 PPOXP50336 477 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 GNG5P63218 68 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 SLAQ13239 276 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 C3orf36Q3SXR2 165 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 SPACA3Q8IXA5 215 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 SCNM1Q9BWG6 230 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 NRN1Q9NPD7 142 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 OSTCQ9NRP0 149 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 TPSG1Q9NRR2 321 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 ZNF355PQ9NSJ1 428 aa9.97□□□□□ -0.81
VPS33B-201ENST00000333371 GFRALQ6UXV0 394 aa9.96□□□□□ -0.81
VPS33B-201ENST00000333371 PATE2Q6UY27 113 aa9.96□□□□□ -0.81
VPS33B-201ENST00000333371 NPIPB3Q92617 1050 aa9.96□□□□□ -0.81
VPS33B-201ENST00000333371 RITA1Q96K30 269 aa9.96□□□□□ -0.81
VPS33B-201ENST00000333371 NDUFA4L2Q9NRX3 87 aa9.96□□□□□ -0.81
VPS33B-201ENST00000333371 BET1LQ9NYM9 111 aa9.96□□□□□ -0.81
VPS33B-201ENST00000333371 DIRC3C9JPN6 131 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 H0YJW9 148 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 NTF3P20783 257 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 CD40P25942 277 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 BRS3P32247 399 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 TAS2R45P59539 299 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 RPL8P62917 257 aaKnown RBP9.96□□□□□ -0.82
VPS33B-201ENST00000333371 TMEM183BQ1AE95 376 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 ATOH7Q8N100 152 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 H1FXQ92522 213 aaKnown RBP9.96□□□□□ -0.82
VPS33B-201ENST00000333371 C20orf144Q9BQM9 153 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 MIEN1Q9BRT3 115 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 WNT10AQ9GZT5 417 aa9.96□□□□□ -0.82
VPS33B-201ENST00000333371 IGHV3-21A0A0B4J1V1 117 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 IGHV3-72A0A0B4J1Y9 119 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 FNDC10F2Z333 226 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 CORTO00230 105 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 ISLRO14498 428 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 TFPI2P48307 235 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 OR1L8Q8NGR8 309 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 DNAJC4Q9NNZ3 241 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 A0A1W2PRE2 83 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 hADV38S2A0JD32 116 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 H3BTX0 84 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
VPS33B-201ENST00000333371 GPR6P46095 362 aaPredicted RBP9.95□□□□□ -0.82
VPS33B-201ENST00000333371 GDF5OSQ5U4N7 250 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 LYPD2Q6UXB3 125 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 OR5B3Q8NH48 314 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 SSBP4Q9BWG4 385 aaPredicted RBP9.95□□□□□ -0.82
VPS33B-201ENST00000333371 NCOR1P1Q9H4R4 102 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 RAB9BQ9NP90 201 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms