RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TIGITQ495A1 244 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 FAM168AQ92567 244 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 IGHV3-21A0A0B4J1V1 117 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 FNDC10F2Z333 226 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 ERHP84090 104 aaKnown RBP20.49■□□□□ 0.87
HOXB3-201ENST00000311626 OSR1Q8TAX0 266 aaPredicted RBP20.49■□□□□ 0.87
HOXB3-201ENST00000311626 FAM167A-AS1Q96KT0 104 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 SGK494Q96LW2 274 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 ATG101Q9BSB4 218 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 NAT8BQ9UHF3 227 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 PPIAL4EA0A075B759 164 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 PPIAL4DF5H284 164 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 PPIAL4FP0DN26 164 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 SELENOTP62341 195 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 NUP37Q8NFH4 326 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 ZNF430Q9H8G1 570 aaPredicted RBP20.49■□□□□ 0.87
HOXB3-201ENST00000311626 RNF114Q9Y508 228 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 PPIAL4AQ9Y536 164 aa20.49■□□□□ 0.87
HOXB3-201ENST00000311626 DLL1O00548 723 aa20.48■□□□□ 0.87
HOXB3-201ENST00000311626 TOMM20LQ6UXN7 152 aa20.48■□□□□ 0.87
HOXB3-201ENST00000311626 OR5AN1Q8NGI8 311 aa20.48■□□□□ 0.87
HOXB3-201ENST00000311626 CTSZQ9UBR2 303 aa20.48■□□□□ 0.87
HOXB3-201ENST00000311626 ENSAO43768 121 aaKnown RBP20.48■□□□□ 0.87
HOXB3-201ENST00000311626 SLC25A17O43808 307 aa20.48■□□□□ 0.87
HOXB3-201ENST00000311626 TAS2R45P59539 299 aa20.48■□□□□ 0.87
HOXB3-201ENST00000311626 TPRP12270 2363 aaKnown RBP20.48■□□□□ 0.87
HOXB3-201ENST00000311626 DNAJC4Q9NNZ3 241 aa20.47■□□□□ 0.87
HOXB3-201ENST00000311626 TMEM178BH3BS89 294 aa20.47■□□□□ 0.87
HOXB3-201ENST00000311626 HCP5Q6MZN7 132 aa20.47■□□□□ 0.87
HOXB3-201ENST00000311626 PATE2Q6UY27 113 aa20.47■□□□□ 0.87
HOXB3-201ENST00000311626 GNB4Q9HAV0 340 aa20.47■□□□□ 0.87
HOXB3-201ENST00000311626 ZNF355PQ9NSJ1 428 aa20.47■□□□□ 0.87
HOXB3-201ENST00000311626 LY96Q9Y6Y9 160 aa20.47■□□□□ 0.87
HOXB3-201ENST00000311626 IGF2-ASQ6U949 168 aa20.46■□□□□ 0.87
HOXB3-201ENST00000311626 TMEM106BQ9NUM4 274 aa20.46■□□□□ 0.87
HOXB3-201ENST00000311626 PTPRZ1P23471 2315 aaPredicted RBP20.46■□□□□ 0.87
HOXB3-201ENST00000311626 PSMB11A5LHX3 300 aa20.46■□□□□ 0.87
HOXB3-201ENST00000311626 TGIF2LXQ8IUE1 241 aa20.46■□□□□ 0.87
HOXB3-201ENST00000311626 CHODLQ9H9P2 273 aa20.46■□□□□ 0.87
HOXB3-201ENST00000311626 RELNP78509 3460 aa20.46■□□□□ 0.87
HOXB3-201ENST00000311626 COX7A2P2O60397 106 aa20.45■□□□□ 0.86
HOXB3-201ENST00000311626 TPPP2P59282 170 aa20.45■□□□□ 0.86
HOXB3-201ENST00000311626 TMEM177Q53S58 311 aa20.45■□□□□ 0.86
HOXB3-201ENST00000311626 IBA57Q5T440 356 aaKnown RBP20.45■□□□□ 0.86
HOXB3-201ENST00000311626 ABHD17AQ96GS6 310 aa20.45■□□□□ 0.86
HOXB3-201ENST00000311626 SAMD10Q9BYL1 202 aa20.45■□□□□ 0.86
HOXB3-201ENST00000311626 IGF2BP2-AS1Q96M15 143 aa20.45■□□□□ 0.86
HOXB3-201ENST00000311626 NDUFB3O43676 98 aa20.44■□□□□ 0.86
HOXB3-201ENST00000311626 MOSP00540 346 aa20.44■□□□□ 0.86
HOXB3-201ENST00000311626 TAS2R60P59551 318 aa20.44■□□□□ 0.86
HOXB3-201ENST00000311626 GNG5P63218 68 aa20.44■□□□□ 0.86
HOXB3-201ENST00000311626 ZZEF1O43149 2961 aa20.44■□□□□ 0.86
HOXB3-201ENST00000311626 IGLV2-23P01705 113 aa20.44■□□□□ 0.86
HOXB3-201ENST00000311626 MEF2CQ06413 473 aaPredicted RBP20.44■□□□□ 0.86
HOXB3-201ENST00000311626 OR4C13Q8NGP0 309 aa20.44■□□□□ 0.86
HOXB3-201ENST00000311626 VN1R17PQ8TDU5 208 aa20.44■□□□□ 0.86
HOXB3-201ENST00000311626 PRRG2O14669 202 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 PPOXP50336 477 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 CX3CL1P78423 397 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 PRR30Q53SZ7 412 aaPredicted RBP20.43■□□□□ 0.86
HOXB3-201ENST00000311626 RCHY1Q96PM5 261 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 C2orf88Q9BSF0 95 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 SNHG12Q9BXW3 62 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 IGKV1D-37A0A075B6S9 117 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 CNTFRP26992 372 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 C1orf194Q5T5A4 169 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 TMEM136Q6ZRR5 245 aa20.43■□□□□ 0.86
HOXB3-201ENST00000311626 LRBAP50851 2863 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 USF1P22415 310 aaPredicted RBP20.42■□□□□ 0.86
HOXB3-201ENST00000311626 C10orf113Q5VZT2 155 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 PRR27Q6MZM9 219 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 PAXXQ9BUH6 204 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 A0A1W2PRE2 83 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 H3BTX0 84 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 ORM2P19652 201 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 TMEM167AQ8TBQ9 72 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 BLNKQ8WV28 456 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 OSTCQ9NRP0 149 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 RPH3ALQ9UNE2 315 aa20.42■□□□□ 0.86
HOXB3-201ENST00000311626 A0A1W2PPI3 338 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 LYNX1G3V0Z9 82 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 LYNX1P0DP58 116 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 PAM16Q9Y3D7 125 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 TRAV9-1A0A075B6T8 112 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 LOXP28300 417 aaPredicted RBP20.41■□□□□ 0.86
HOXB3-201ENST00000311626 LRRC10Q5BKY1 277 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 BEND2Q8NDZ0 799 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 CACNG8Q8WXS5 425 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 GNB1LQ9BYB4 327 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 AMMECR1Q9Y4X0 333 aaPredicted RBP20.41■□□□□ 0.86
HOXB3-201ENST00000311626 CSMD1Q96PZ7 3565 aa20.41■□□□□ 0.86
HOXB3-201ENST00000311626 RANP62826 216 aaKnown RBP20.4■□□□□ 0.86
HOXB3-201ENST00000311626 GSX1Q9H4S2 264 aaPredicted RBP20.4■□□□□ 0.86
HOXB3-201ENST00000311626 TMEM30BQ3MIR4 351 aa20.4■□□□□ 0.86
HOXB3-201ENST00000311626 TPTE2P1Q5T6R2 138 aa20.4■□□□□ 0.86
HOXB3-201ENST00000311626 ZNF705AQ6ZN79 300 aaPredicted RBP20.4■□□□□ 0.86
HOXB3-201ENST00000311626 ARL2-SNX15V9GYD0 113 aa20.4■□□□□ 0.86
HOXB3-201ENST00000311626 GFRALQ6UXV0 394 aa20.4■□□□□ 0.86
HOXB3-201ENST00000311626 ST6GALNAC6Q969X2 333 aa20.4■□□□□ 0.86
HOXB3-201ENST00000311626 FBXL7Q9UJT9 491 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms