RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 NSUN5P1Q3KNT7 163 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 SPATA45Q537H7 98 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 S100A7L2Q5SY68 101 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 SCGB3A1Q96QR1 104 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 TRGV11A0A075B6L2 103 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 PRR32B1ATL7 298 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 SMIM6P0DI80 62 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 SMIM13P0DJ93 91 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 IFI27P40305 119 aaPredicted RBP7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 TCF15Q12870 199 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF826PQ6ZT77 177 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 SPAG8Q99932 426 aaPredicted RBP7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 PLSCR2Q9NRY7 297 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 FASNP49327 2511 aaKnown RBP7□□□□□ -1.29
PCDHB1-201ENST00000306549 C7orf77A4D0Y5 90 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 CTSBP07858 339 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 PRSS33Q8NF86 280 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF414Q96IQ9 312 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 CST9LQ9H4G1 147 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 UQCR10Q9UDW1 63 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 RNASE4P34096 147 aaKnown RBP7□□□□□ -1.29
PCDHB1-201ENST00000306549 CKS1BP61024 79 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 TMEM155Q4W5P6 130 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 LINC01590Q5TEZ4 76 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 FGFRL1Q8N441 504 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 RNF5Q99942 180 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 RNF114Q9Y508 228 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 RRHO14718 337 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 CD200R1LQ6Q8B3 271 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF818PQ6ZRF7 136 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 TAF15Q92804 592 aaKnown RBP eCLIP7□□□□□ -1.29
PCDHB1-201ENST00000306549 PQLC2LA1A4F0 135 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 ARL14EPLP0DKL9 152 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 HBBP68871 147 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 PSG7Q13046 419 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 MIC13Q5XKP0 118 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 LINC01356Q8N9X3 169 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 SLC25A38Q96DW6 304 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 AURKAIP1Q9NWT8 199 aaPredicted RBP7□□□□□ -1.29
PCDHB1-201ENST00000306549 TMEM160Q9NX00 188 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 YPEL1O60688 119 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 TNFRSF9Q07011 255 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 WDR82Q6UXN9 313 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 OR10S1Q8NGN2 331 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 YPEL2Q96QA6 119 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 HSPB9Q9BQS6 159 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 TRAV24A0A0B4J272 114 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 RPL32P62910 135 aaKnown RBP7□□□□□ -1.29
PCDHB1-201ENST00000306549 UNC119Q13432 240 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 LINC00305Q7Z4B0 112 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 GGNQ86UU5 652 aa7□□□□□ -1.29
PCDHB1-201ENST00000306549 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 GPR183P32249 361 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 OR5AN1Q8NGI8 311 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 TCF19Q9Y242 345 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 SLC25A15Q9Y619 301 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 FAM90A9PA6NNJ1 464 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 RNF182Q8N6D2 247 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 RARRES2Q99969 163 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 A0A0G2JMM0 328 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 A0A1W2PPB8 328 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 A0A1W2PRS3 328 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 KIR3DP1A8MWS1 328 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 CELA3AP09093 270 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 CCL1P22362 96 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 CRYGSP22914 178 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF600Q6ZNG1 722 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 CACNG8Q8WXS5 425 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 NRN1Q9NPD7 142 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 NAPSAO96009 420 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 NANOS3P60323 173 aaKnown RBP6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 RNASEH2CQ8TDP1 164 aaKnown RBP6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 A0A0G2JNJ9 132 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 IGSF11Q5DX21 431 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 CYP2G1PQ6ZSU1 146 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 SLC50A1Q9BRV3 221 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 PRR13Q9NZ81 148 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 FBLN5Q9UBX5 448 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 Q9UFV3 132 aa6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 SNRPCP09234 159 aaKnown RBP6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 HOXD3P31249 432 aaPredicted RBP6.99□□□□□ -1.29
PCDHB1-201ENST00000306549 HSPB1P04792 205 aaKnown RBP6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 ICAM4Q14773 271 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 OR10J3Q5JRS4 329 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 FAM71F2Q6NXP2 309 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 CLEC19AQ6UXS0 136 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 NPIPB3Q92617 1050 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 JPT2Q9H910 190 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 TGFBR3LH3BV60 316 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 SCTP09683 121 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 CPAMD8Q8IZJ3 1885 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 TEX45Q8NA69 505 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 NPCDR1Q9BY65 106 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 F11RQ9Y624 299 aaKnown RBP6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 LINC01549A6NIU2 74 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 INSL4Q14641 139 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 VKORC1L1Q8N0U8 176 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 FMC1Q96HJ9 113 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms