RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZNF714Q96N38 554 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 ABCA4P78363 2273 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 LRBAP50851 2863 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 TRAV5A0A0B4J249 113 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 H0YJW9 148 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 PRRG2O14669 202 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 MT-CO2P00403 227 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 TPPP2P59282 170 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF833PQ6ZTB9 187 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 EAF1Q96JC9 268 aaPredicted RBP10.46□□□□□ -0.73
HIF3A-204ENST00000300862 UHRF2Q96PU4 802 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 HSPB9Q9BQS6 159 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 COMMD5Q9GZQ3 224 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 GAL3ST2Q9H3Q3 398 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 RNF114Q9Y508 228 aa10.46□□□□□ -0.73
HIF3A-204ENST00000300862 ESDP10768 282 aa10.46□□□□□ -0.74
HIF3A-204ENST00000300862 CENPWQ5EE01 88 aa10.46□□□□□ -0.74
HIF3A-204ENST00000300862 PQLC2Q6ZP29 291 aa10.46□□□□□ -0.74
HIF3A-204ENST00000300862 OR10X1Q8NGY0 326 aa10.46□□□□□ -0.74
HIF3A-204ENST00000300862 BET1LQ9NYM9 111 aa10.46□□□□□ -0.74
HIF3A-204ENST00000300862 GGTLC3B5MD39 225 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 APOA2P02652 100 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 SUMO1P63165 101 aaKnown RBP10.45□□□□□ -0.74
HIF3A-204ENST00000300862 PRR30Q53SZ7 412 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-204ENST00000300862 OR5B3Q8NH48 314 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 VN1R17PQ8TDU5 208 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 PPIAL4EA0A075B759 164 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 IGHV3-72A0A0B4J1Y9 119 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 PPIAL4DF5H284 164 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 TMEM178BH3BS89 294 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 REG1AP05451 166 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 LINC00614P0C842 121 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 PPIAL4FP0DN26 164 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 RPL8P62917 257 aaKnown RBP10.45□□□□□ -0.74
HIF3A-204ENST00000300862 SLC35B1P78383 322 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 FXYD3Q14802 87 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 BATFQ16520 125 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 TMEM183BQ1AE95 376 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 C2orf83Q53S99 150 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 C11orf52Q96A22 123 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 FLYWCH2Q96CP2 140 aaKnown RBP10.45□□□□□ -0.74
HIF3A-204ENST00000300862 RITA1Q96K30 269 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 RNASE7Q9H1E1 156 aaKnown RBP10.45□□□□□ -0.74
HIF3A-204ENST00000300862 TECRQ9NZ01 308 aaKnown RBP10.45□□□□□ -0.74
HIF3A-204ENST00000300862 CTSZQ9UBR2 303 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 PPIAL4AQ9Y536 164 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 ZZEF1O43149 2961 aa10.45□□□□□ -0.74
HIF3A-204ENST00000300862 MALRD1Q5VYJ5 2156 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 HELTA6NFD8 242 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 PAFAH1B2P68402 229 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 CD69Q07108 199 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 GFRALQ6UXV0 394 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 VAMP8Q9BV40 100 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
HIF3A-204ENST00000300862 TPSG1Q9NRR2 321 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 NDUFA4L2Q9NRX3 87 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 IL36BQ9NZH7 164 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 APELAP0DMC3 54 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 AREGP15514 252 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 CRISP2P16562 243 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 IER3P46695 156 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 GNG4P50150 75 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 WT1-ASQ06250 92 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 LHFPL4Q7Z7J7 247 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 NHLRC2Q8NBF2 726 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 OR5AN1Q8NGI8 311 aa10.44□□□□□ -0.74
HIF3A-204ENST00000300862 OSR1Q8TAX0 266 aaPredicted RBP10.44□□□□□ -0.74
HIF3A-204ENST00000300862 CGB1A6NKQ9 187 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 TFPI2P48307 235 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 TCL1AP56279 114 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 OR8I2Q8N0Y5 310 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 Q8NA96 180 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 OR1L8Q8NGR8 309 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 LINC00479Q96M42 142 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
HIF3A-204ENST00000300862 DCHS2Q6V1P9 2916 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 FNDC10F2Z333 226 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 ERHP84090 104 aaKnown RBP10.43□□□□□ -0.74
HIF3A-204ENST00000300862 MEF2CQ06413 473 aaPredicted RBP10.43□□□□□ -0.74
HIF3A-204ENST00000300862 MMD2Q8IY49 270 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 Q8N976 141 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 OR1L6Q8NGR2 347 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 SLC35E1Q96K37 410 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 TMEM167BQ9NRX6 74 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 MRPL36Q9P0J6 103 aaKnown RBP10.43□□□□□ -0.74
HIF3A-204ENST00000300862 FBXL7Q9UJT9 491 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 V9GYV3 84 aa10.43□□□□□ -0.74
HIF3A-204ENST00000300862 C9JCJ5 164 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 NDUFB3O43676 98 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 SLC25A17O43808 307 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 PLAUP00749 431 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 OR5G3P0C626 314 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 PYYP10082 97 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 LGALS4P56470 323 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 C19orf35Q6ZS72 473 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 OR5AU1Q8NGC0 362 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 NPIPB3Q92617 1050 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 SLC25A33Q9BSK2 321 aa10.42□□□□□ -0.74
HIF3A-204ENST00000300862 ZNF430Q9H8G1 570 aaPredicted RBP10.42□□□□□ -0.74
HIF3A-204ENST00000300862 ENSAO43768 121 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms