RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 MLANAQ16655 118 aa18.53■□□□□ 0.56
U2AF1-201ENST00000291552 AARDQ4LEZ3 155 aa18.53■□□□□ 0.56
U2AF1-201ENST00000291552 FAM24BQ8N5W8 94 aa18.53■□□□□ 0.56
U2AF1-201ENST00000291552 C15orf40Q8WUR7 153 aa18.53■□□□□ 0.56
U2AF1-201ENST00000291552 RTBDNQ9BSG5 229 aaPredicted RBP18.53■□□□□ 0.56
U2AF1-201ENST00000291552 TMEM222Q9H0R3 208 aa18.53■□□□□ 0.56
U2AF1-201ENST00000291552 VPS13DQ5THJ4 4388 aa18.52■□□□□ 0.56
U2AF1-201ENST00000291552 NUPR2A6NF83 97 aa18.52■□□□□ 0.56
U2AF1-201ENST00000291552 OR5AC1P0C628 307 aa18.52■□□□□ 0.56
U2AF1-201ENST00000291552 CEMP1Q6PRD7 247 aaPredicted RBP18.52■□□□□ 0.56
U2AF1-201ENST00000291552 SMIM4Q8WVI0 70 aa18.52■□□□□ 0.56
U2AF1-201ENST00000291552 PDCD10Q9BUL8 212 aa18.52■□□□□ 0.56
U2AF1-201ENST00000291552 C6orf62Q9GZU0 229 aaPredicted RBP18.52■□□□□ 0.56
U2AF1-201ENST00000291552 CSTL1Q9H114 145 aa18.52■□□□□ 0.56
U2AF1-201ENST00000291552 MS4A6AQ9H2W1 248 aa18.52■□□□□ 0.56
U2AF1-201ENST00000291552 DNAH10Q8IVF4 4471 aa18.52■□□□□ 0.56
U2AF1-201ENST00000291552 DNAH6Q9C0G6 4158 aa18.52■□□□□ 0.55
U2AF1-201ENST00000291552 CORTO00230 105 aa18.51■□□□□ 0.55
U2AF1-201ENST00000291552 CMC4P56277 68 aaPredicted RBP18.51■□□□□ 0.55
U2AF1-201ENST00000291552 SSBP1Q04837 148 aaKnown RBP18.51■□□□□ 0.55
U2AF1-201ENST00000291552 GLYATL2Q8WU03 294 aa18.51■□□□□ 0.55
U2AF1-201ENST00000291552 RRNAD1Q96FB5 475 aaKnown RBP18.51■□□□□ 0.55
U2AF1-201ENST00000291552 MRPS26Q9BYN8 205 aaKnown RBP18.51■□□□□ 0.55
U2AF1-201ENST00000291552 RGS5O15539 181 aa18.5■□□□□ 0.55
U2AF1-201ENST00000291552 CLN5O75503 358 aa18.5■□□□□ 0.55
U2AF1-201ENST00000291552 CDS2O95674 445 aa18.5■□□□□ 0.55
U2AF1-201ENST00000291552 OR4C16Q8NGL9 310 aa18.5■□□□□ 0.55
U2AF1-201ENST00000291552 NAA60Q9H7X0 242 aa18.5■□□□□ 0.55
U2AF1-201ENST00000291552 MPTX1A8MV57 137 aa18.49■□□□□ 0.55
U2AF1-201ENST00000291552 B3GALNT1O75752 331 aa18.49■□□□□ 0.55
U2AF1-201ENST00000291552 IGKV1-17P01599 117 aa18.49■□□□□ 0.55
U2AF1-201ENST00000291552 OPRK1P41145 380 aa18.49■□□□□ 0.55
U2AF1-201ENST00000291552 RPL5P46777 297 aaKnown RBP18.49■□□□□ 0.55
U2AF1-201ENST00000291552 SUB1P53999 127 aaKnown RBP eCLIP18.49■□□□□ 0.55
U2AF1-201ENST00000291552 MRPS10P82664 201 aaKnown RBP18.49■□□□□ 0.55
U2AF1-201ENST00000291552 MEF2DQ14814 521 aa18.49■□□□□ 0.55
U2AF1-201ENST00000291552 GPR141Q7Z602 305 aa18.49■□□□□ 0.55
U2AF1-201ENST00000291552 OR4X1Q8NH49 305 aa18.49■□□□□ 0.55
U2AF1-201ENST00000291552 RNASE11Q8TAA1 199 aaKnown RBP18.49■□□□□ 0.55
U2AF1-201ENST00000291552 CD5P06127 495 aa18.48■□□□□ 0.55
U2AF1-201ENST00000291552 DEFB131AP59861 70 aa18.48■□□□□ 0.55
U2AF1-201ENST00000291552 SPCS3P61009 180 aa18.48■□□□□ 0.55
U2AF1-201ENST00000291552 PAFAH1B2P68402 229 aa18.48■□□□□ 0.55
U2AF1-201ENST00000291552 LEMD1Q68G75 181 aa18.48■□□□□ 0.55
U2AF1-201ENST00000291552 FAM219AQ8IW50 185 aa18.48■□□□□ 0.55
U2AF1-201ENST00000291552 SELENOHQ8IZQ5 122 aaKnown RBP18.48■□□□□ 0.55
U2AF1-201ENST00000291552 GATAD1Q8WUU5 269 aa18.48■□□□□ 0.55
U2AF1-201ENST00000291552 ENY2Q9NPA8 101 aa18.48■□□□□ 0.55
U2AF1-201ENST00000291552 TRAV2A0A0B4J234 112 aa18.47■□□□□ 0.55
U2AF1-201ENST00000291552 TEX13DA0A0J9YY54 714 aaPredicted RBP18.47■□□□□ 0.55
U2AF1-201ENST00000291552 SURF2Q15527 256 aaPredicted RBP18.47■□□□□ 0.55
U2AF1-201ENST00000291552 TIGITQ495A1 244 aa18.47■□□□□ 0.55
U2AF1-201ENST00000291552 OR52E5Q8NH55 327 aa18.47■□□□□ 0.55
U2AF1-201ENST00000291552 TMEM170AQ8WVE7 144 aa18.47■□□□□ 0.55
U2AF1-201ENST00000291552 RBPMSQ93062 196 aaKnown RBP18.47■□□□□ 0.55
U2AF1-201ENST00000291552 GPR146Q96CH1 333 aa18.47■□□□□ 0.55
U2AF1-201ENST00000291552 CACNG5Q9UF02 275 aa18.47■□□□□ 0.55
U2AF1-201ENST00000291552 C14orf166Q9Y224 244 aaKnown RBP18.47■□□□□ 0.55
U2AF1-201ENST00000291552 CRYM-AS1A6NIL9 109 aa18.46■□□□□ 0.55
U2AF1-201ENST00000291552 LY6G6CO95867 125 aa18.46■□□□□ 0.55
U2AF1-201ENST00000291552 CRYBB3P26998 211 aa18.46■□□□□ 0.55
U2AF1-201ENST00000291552 GPR132Q9UNW8 380 aa18.46■□□□□ 0.55
U2AF1-201ENST00000291552 DNASE2O00115 360 aaPredicted RBP18.45■□□□□ 0.54
U2AF1-201ENST00000291552 CTDSPLO15194 276 aa18.45■□□□□ 0.54
U2AF1-201ENST00000291552 CA1P00915 261 aaPredicted RBP18.45■□□□□ 0.54
U2AF1-201ENST00000291552 NPPCP23582 126 aa18.45■□□□□ 0.54
U2AF1-201ENST00000291552 TMEM217Q8N7C4 229 aa18.45■□□□□ 0.54
U2AF1-201ENST00000291552 DYNC2LI1Q8TCX1 351 aa18.45■□□□□ 0.54
U2AF1-201ENST00000291552 RARRES2Q99969 163 aa18.45■□□□□ 0.54
U2AF1-201ENST00000291552 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.45■□□□□ 0.54
U2AF1-201ENST00000291552 DISC1C4P0D8 188 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 K7EQG2 157 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 AKAIN1P0CW23 69 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 TMEM268Q5VZI3 342 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 CLVS1Q8IUQ0 354 aaPredicted RBP18.44■□□□□ 0.54
U2AF1-201ENST00000291552 OR11H2Q8NH07 326 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 PHLDA1Q8WV24 401 aaPredicted RBP18.44■□□□□ 0.54
U2AF1-201ENST00000291552 TMEM230Q96A57 120 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 METTL26Q96S19 204 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 C11orf68Q9H3H3 251 aaKnown RBP18.44■□□□□ 0.54
U2AF1-201ENST00000291552 TMEM231Q9H6L2 316 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 PRR13Q9NZ81 148 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 CCDC59Q9P031 241 aaKnown RBP18.44■□□□□ 0.54
U2AF1-201ENST00000291552 RABAC1Q9UI14 185 aa18.44■□□□□ 0.54
U2AF1-201ENST00000291552 IGLC1P0CG04 106 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 HTR2BP41595 481 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 P2RY1P47900 373 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 RPL11P62913 178 aaKnown RBP18.43■□□□□ 0.54
U2AF1-201ENST00000291552 DHODHQ02127 395 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 IL18Q14116 193 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 C2orf83Q53S99 150 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 PRSS54Q6PEW0 395 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 OR51S1Q8NGJ8 323 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 DIRAS2Q96HU8 199 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 TMEM56-RWDD3S4R434 201 aa18.43■□□□□ 0.54
U2AF1-201ENST00000291552 GIG44P09565 113 aaPredicted RBP18.42■□□□□ 0.54
U2AF1-201ENST00000291552 RBMS2Q15434 407 aaKnown RBP18.42■□□□□ 0.54
U2AF1-201ENST00000291552 STXBP6Q8NFX7 210 aa18.42■□□□□ 0.54
U2AF1-201ENST00000291552 HEYLQ9NQ87 328 aaPredicted RBP18.42■□□□□ 0.54
U2AF1-201ENST00000291552 KLK5Q9Y337 293 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms