RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 TP53RKQ96S44 253 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 VSIRQ9H7M9 311 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 KLK11Q9UBX7 282 aa10.32□□□□□ -0.76
TPM1-202ENST00000288398 C14orf166Q9Y224 244 aaKnown RBP10.32□□□□□ -0.76
TPM1-202ENST00000288398 PLECQ15149 4684 aaKnown RBP10.31□□□□□ -0.76
TPM1-202ENST00000288398 HYDINQ4G0P3 5121 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 TRAV30A0A087WSZ9 112 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 INS-IGF2F8WCM5 200 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 ETV6P41212 452 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 TAS2R19P59542 299 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 NANOS2P60321 138 aaKnown RBP10.31□□□□□ -0.76
TPM1-202ENST00000288398 TMEM41BQ5BJD5 291 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 LGALS9CQ6DKI2 356 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 OR52I2Q8NH67 350 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 C2CD4CQ8TF44 421 aa10.31□□□□□ -0.76
TPM1-202ENST00000288398 A0A0B4J293 547 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 TEX13DA0A0J9YY54 714 aaPredicted RBP10.3□□□□□ -0.76
TPM1-202ENST00000288398 CLN5O75503 358 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 RAB3DO95716 219 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 APOHP02749 345 aaPredicted RBP10.3□□□□□ -0.76
TPM1-202ENST00000288398 RNASE2P10153 161 aaKnown RBP10.3□□□□□ -0.76
TPM1-202ENST00000288398 ZNF182P17025 639 aaPredicted RBP10.3□□□□□ -0.76
TPM1-202ENST00000288398 SP6Q3SY56 376 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 LHFPL1Q86WI0 220 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 FAM219AQ8IW50 185 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 TERB2Q8NHR7 220 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 ZNF414Q96IQ9 312 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 ZFAND3Q9H8U3 227 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 HEYLQ9NQ87 328 aaPredicted RBP10.3□□□□□ -0.76
TPM1-202ENST00000288398 MTFP1Q9UDX5 166 aa10.3□□□□□ -0.76
TPM1-202ENST00000288398 A0A1B0GU03 582 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 DEFB4AO15263 64 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 RGS5O15539 181 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 HTR2BP41595 481 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 P2RY1P47900 373 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 TCTAP57738 103 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 SPCS3P61009 180 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 MORN3Q6PF18 240 aaPredicted RBP10.29□□□□□ -0.76
TPM1-202ENST00000288398 RPP25LQ8N5L8 163 aaKnown RBP10.29□□□□□ -0.76
TPM1-202ENST00000288398 TMEM229BQ8NBD8 167 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 OR13C8Q8NGS7 320 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 OR4X1Q8NH49 305 aa10.29□□□□□ -0.76
TPM1-202ENST00000288398 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.29□□□□□ -0.76
TPM1-202ENST00000288398 HELTA6NFD8 242 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 CEBPZOSA8MTT3 80 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 DISC1C4P0D8 188 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 SPP1P10451 314 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 UCP1P25874 307 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 RPL5P46777 297 aaKnown RBP10.28□□□□□ -0.76
TPM1-202ENST00000288398 MEF2DQ14814 521 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 STEAP1BQ6NZ63 245 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 MARCH1Q8TCQ1 289 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 Q8WTZ3 238 aa10.28□□□□□ -0.76
TPM1-202ENST00000288398 C11orf94C9JXX5 98 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 DEDDO75618 318 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 ZNF688P0C7X2 276 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 P0C879 139 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 SLC25A4P12235 298 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 CRYBB3P26998 211 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 AP2S1P53680 142 aaPredicted RBP10.27□□□□□ -0.77
TPM1-202ENST00000288398 MRPS10P82664 201 aaKnown RBP10.27□□□□□ -0.77
TPM1-202ENST00000288398 DHODHQ02127 395 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 DHRS2Q13268 280 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 TIGITQ495A1 244 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 ETFRF1Q6IPR1 90 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 NOXA1Q86UR1 476 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 LILRB2Q8N423 598 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 OR1S2Q8NGQ3 325 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 TMEM222Q9H0R3 208 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 CACFD1Q9UGQ2 172 aa10.27□□□□□ -0.77
TPM1-202ENST00000288398 IGLL5B9A064 214 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 GABARAPH6UMI1 98 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 K7EQG2 157 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 GABARAPO95166 117 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 CD74P04233 296 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 HNRNPCP07910 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
TPM1-202ENST00000288398 OR5AC1P0C628 307 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 MIFP14174 115 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 SSBP1Q04837 148 aaKnown RBP10.26□□□□□ -0.77
TPM1-202ENST00000288398 ACTL10Q5JWF8 245 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 GPR107Q5VW38 600 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 PVRIGQ6DKI7 326 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 FAM24BQ8N5W8 94 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 SLC24A4Q8NFF2 622 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 OR4D10Q8NGI6 311 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 OR52E5Q8NH55 327 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
TPM1-202ENST00000288398 RBPMSQ93062 196 aaKnown RBP10.26□□□□□ -0.77
TPM1-202ENST00000288398 ABHD1Q96SE0 405 aa10.26□□□□□ -0.77
TPM1-202ENST00000288398 FNDC4Q9H6D8 234 aaPredicted RBP10.26□□□□□ -0.77
TPM1-202ENST00000288398 GSTZ1O43708 216 aaPredicted RBP10.25□□□□□ -0.77
TPM1-202ENST00000288398 OR10J1P30954 320 aa10.25□□□□□ -0.77
TPM1-202ENST00000288398 RND2P52198 227 aa10.25□□□□□ -0.77
TPM1-202ENST00000288398 NUTF2P61970 127 aaKnown RBP10.25□□□□□ -0.77
TPM1-202ENST00000288398 SNRPD3P62318 126 aaKnown RBP10.25□□□□□ -0.77
TPM1-202ENST00000288398 SURF2Q15527 256 aaPredicted RBP10.25□□□□□ -0.77
TPM1-202ENST00000288398 TMEM268Q5VZI3 342 aa10.25□□□□□ -0.77
TPM1-202ENST00000288398 TRPT1Q86TN4 253 aaKnown RBP10.25□□□□□ -0.77
TPM1-202ENST00000288398 NAA60Q9H7X0 242 aa10.25□□□□□ -0.77
TPM1-202ENST00000288398 CACNG5Q9UF02 275 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms