RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 FBXL7Q9UJT9 491 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 IGHG4P01861 327 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 Q6AWC8 147 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 LHX9Q9NQ69 397 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 COL14A1Q05707 1796 aaKnown RBP13.38□□□□□ -0.27
UBR3-201ENST00000272793 EXPH5Q8NEV8 1989 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 ZP1P60852 638 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 C1orf210Q8IVY1 113 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 TMEM54Q969K7 222 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 C21orf62Q9NYP8 219 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 SERF1AO75920 110 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 LHX2P50458 406 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 SPRED2Q7Z698 418 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 RPL35AP18077 110 aaKnown RBP13.37□□□□□ -0.27
UBR3-201ENST00000272793 DEFB105AQ8NG35 78 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 A0A087X0K7 114 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 FABP5P3A8MUU1 101 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 FOXH1O75593 365 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 SS18Q15532 418 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 GAGE12BA1L429 117 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 LIPT2A6NK58 231 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 ZNF729A6NN14 1252 aaPredicted RBP13.37□□□□□ -0.27
UBR3-201ENST00000272793 CHAC1Q9BUX1 264 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 BRCA1P38398 1863 aaKnown RBP13.37□□□□□ -0.27
UBR3-201ENST00000272793 LRRC37A3O60309 1634 aa13.37□□□□□ -0.27
UBR3-201ENST00000272793 EREGO14944 169 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 MESP2Q0VG99 397 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 TEX43Q6ZNM6 134 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 RASL10BQ96S79 203 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 ZNF474Q6S9Z5 364 aaPredicted RBP13.36□□□□□ -0.27
UBR3-201ENST00000272793 BHLHA9Q7RTU4 235 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 WNT2P09544 360 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 BCL6BQ8N143 479 aaPredicted RBP13.36□□□□□ -0.27
UBR3-201ENST00000272793 LINC00615Q96LM1 132 aaPredicted RBP13.36□□□□□ -0.27
UBR3-201ENST00000272793 RIPPLY2Q5TAB7 128 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 ADAMTSL5Q6ZMM2 481 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 ATG4DQ86TL0 474 aaPredicted RBP13.36□□□□□ -0.27
UBR3-201ENST00000272793 NRTNQ99748 197 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 PTPRQQ9UMZ3 2332 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 IGHV3-11P01762 117 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 TMEM158Q8WZ71 300 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 SLC25A38Q96DW6 304 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 ASCL2Q99929 193 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 OTORQ9NRC9 128 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 C2CD4DB7Z1M9 353 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 C5P01031 1676 aa13.36□□□□□ -0.27
UBR3-201ENST00000272793 BTAF1O14981 1849 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 MYOD1P15172 320 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 SRSF7Q16629 238 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBR3-201ENST00000272793 FAM90A2PQ658T7 463 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 IFI27L1Q96BM0 104 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 SF3B5Q9BWJ5 86 aaKnown RBP13.35□□□□□ -0.27
UBR3-201ENST00000272793 TAL2Q16559 108 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 NEUROG3Q9Y4Z2 214 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 TMEM131Q92545 1883 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 ZNF561-AS1K7EIQ3 104 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 PCOLCEQ15113 449 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 DANCRP0C864 163 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 NPIPB13A6NJU9 1138 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 NPIPB5A8MRT5 1133 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 NDUFA2O43678 99 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 IGHV3-53P01767 116 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 PEBP1P30086 187 aaKnown RBP13.35□□□□□ -0.27
UBR3-201ENST00000272793 TMEM144Q7Z5S9 345 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 ZPLD1Q8TCW7 415 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 DLEC1Q9Y238 1755 aa13.35□□□□□ -0.27
UBR3-201ENST00000272793 FAM90A20PA6NIJ5 464 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 FXYD7P58549 80 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 CIARTQ8N365 385 aaPredicted RBP13.34□□□□□ -0.27
UBR3-201ENST00000272793 HRKO00198 91 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 FHL5Q5TD97 284 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 DMRTC2Q8IXT2 367 aaPredicted RBP13.34□□□□□ -0.27
UBR3-201ENST00000272793 LINC01555Q8NAE3 123 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 PSG1P11464 419 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 MAST2Q6P0Q8 1798 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 ZP4Q12836 540 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 C2orf68Q2NKX9 166 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 RS1O15537 224 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 CD300LDQ6UXZ3 194 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 SPTSSBQ8NFR3 76 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 DENND4CQ5VZ89 1909 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 IGFBP2P18065 325 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 ANKRD29Q8N6D5 301 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 NABP1Q96AH0 204 aa13.34□□□□□ -0.27
UBR3-201ENST00000272793 RCHY1Q96PM5 261 aa13.33□□□□□ -0.27
UBR3-201ENST00000272793 SPSB2Q99619 263 aa13.33□□□□□ -0.27
UBR3-201ENST00000272793 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.33□□□□□ -0.27
UBR3-201ENST00000272793 NAV3Q8IVL0 2385 aa13.33□□□□□ -0.27
UBR3-201ENST00000272793 C22orf46C9J442 243 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 PTP4A3O75365 173 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 TRBV5-4A0A0C4DH59 114 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 CT83Q5H943 113 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 RFLNBQ8N5W9 214 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 RASL10AQ92737 203 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 A0A0G2JMM0 328 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 A0A1W2PPB8 328 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 KIR3DP1A8MWS1 328 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 CELA2BP08218 269 aaPredicted RBP13.33□□□□□ -0.28
UBR3-201ENST00000272793 DRAM1Q8N682 238 aa13.33□□□□□ -0.28
UBR3-201ENST00000272793 ATP5IP56385 69 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms