RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SAP30LQ9HAJ7 183 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 PKDREJQ9NTG1 2253 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 IGHV3OR15-7A0A075B7D8 119 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 OR10AG1Q8NH19 301 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 ZNF835Q9Y2P0 537 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 SPCS1Q9Y6A9 102 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 SPINT2O43291 252 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 ZNF137PP52743 207 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 UTF1Q5T230 341 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 Q8IYB0 196 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 ENY2Q9NPA8 101 aa11.65□□□□□ -0.54
PCDHB3-201ENST00000231130 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 P0C879 139 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 OPRK1P41145 380 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 CKS1BP61024 79 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 TIMM8AO60220 97 aaPredicted RBP11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 ZNF138P52744 262 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 ZNF146Q15072 292 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 CNEP1R1Q8N9A8 125 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 MAFAQ8NHW3 353 aaPredicted RBP11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 FAM168AQ92567 244 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 LINC00470Q9BZP3 86 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 TCF19Q9Y242 345 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 PROP1O75360 226 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 ERVK11-1P61568 191 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 VWC2Q2TAL6 325 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 TMEM105Q8N8V8 129 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 ZBTB34Q8NCN2 500 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 FAM173AQ9BQD7 235 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 JKAMPQ9P055 326 aa11.64□□□□□ -0.55
PCDHB3-201ENST00000231130 DYSFO75923 2080 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 IGKV3D-15A0A087WSY6 115 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 C2orf70A6NJV1 201 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 GFRA3O60609 400 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 HIST1H1AQ02539 215 aaPredicted RBP11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 TMEM97Q5BJF2 176 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 Q8TCH9 128 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 S1PR3Q99500 378 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 DUSP13Q9UII6 198 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 CNOT1A5YKK6 2376 aaKnown RBP11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 RAB31Q13636 194 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 TBR1Q16650 682 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 ZNF718Q3SXZ3 478 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 COX19Q49B96 90 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 ATP6V0BQ99437 205 aa11.63□□□□□ -0.55
PCDHB3-201ENST00000231130 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 DUTP33316 252 aaKnown RBP11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 ZNRF1Q8ND25 227 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 STXBP6Q8NFX7 210 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 KLF14Q8TD94 323 aaPredicted RBP11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 COMMD5Q9GZQ3 224 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 TNRC6AQ8NDV7 1962 aaKnown RBP11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 A0A0G2JLM5 398 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 TEX48A0A1B0GUV7 120 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 REG1AP05451 166 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 NRN1LQ496H8 165 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 RAB1CQ92928 201 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 TSSC4Q9Y5U2 329 aaPredicted RBP11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 INTS1Q8N201 2190 aaKnown RBP11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 K7ESF4 209 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 SS18L1O75177 396 aaPredicted RBP11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 GUCD1Q96NT3 240 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 MAP1LC3CQ9BXW4 147 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 TANC2Q9HCD6 1990 aa11.62□□□□□ -0.55
PCDHB3-201ENST00000231130 CFAP47Q6ZTR5 3102 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 A6NDN8 102 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 FAM201AQ5SY85 155 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 NAV3Q8IVL0 2385 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 PCNX1Q96RV3 2341 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 PLAUP00749 431 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 CRYBA4P53673 196 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 FOXE3Q13461 319 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 LRRC29Q8WV35 223 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 SIT1Q9Y3P8 196 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 TRAV5A0A0B4J249 113 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 SLC35E4Q6ICL7 350 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 DHRS13Q6UX07 377 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 NABP2Q9BQ15 211 aa11.61□□□□□ -0.55
PCDHB3-201ENST00000231130 SMG1Q96Q15 3661 aaKnown RBP11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 K7EQM0 130 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 TNFSF15O95150 251 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 ZNF134P52741 427 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 HSD52Q0P140 79 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 C6orf15Q6UXA7 325 aaPredicted RBP11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 DEFB108BQ8NET1 73 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 JMJD8Q96S16 334 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 TRGV10A0A0A0MS01 117 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 IZUMO1RA6ND01 250 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 MPDU1O75352 247 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 ACP7Q6ZNF0 438 aa11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 CDX2Q99626 313 aaPredicted RBP11.6□□□□□ -0.55
PCDHB3-201ENST00000231130 ADH4P08319 380 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 MEOX1P50221 254 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 TRIP6Q15654 476 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms