RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ZNF383Q8NA42 475 aa15.27■□□□□ 0.04
CLIP2-201ENST00000223398 ZNF25P17030 456 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-201ENST00000223398 FER1L5A0AVI2 2057 aa15.27■□□□□ 0.03
CLIP2-201ENST00000223398 LY6G6EA0A0G2JKS1 128 aa15.27■□□□□ 0.03
CLIP2-201ENST00000223398 U3KQA8 63 aa15.27■□□□□ 0.03
CLIP2-201ENST00000223398 CD7P09564 240 aa15.27■□□□□ 0.03
CLIP2-201ENST00000223398 LYPD2Q6UXB3 125 aa15.27■□□□□ 0.03
CLIP2-201ENST00000223398 TMEM101Q96IK0 257 aa15.27■□□□□ 0.03
CLIP2-201ENST00000223398 CD8AP01732 235 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 UQCRFS1P47985 274 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 C5orf24Q7Z6I8 188 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 ZNF329Q86UD4 541 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 PAX8Q06710 450 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 FBLN7Q53RD9 439 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 SDF2L1Q9HCN8 221 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 E7EQL1 145 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 ZNF600Q6ZNG1 722 aa15.26■□□□□ 0.03
CLIP2-201ENST00000223398 A0A087X0M5 115 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 A0A1B0GX30 115 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 FREM3P0C091 2139 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 PLA2G2CQ5R387 149 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 TMEM144Q7Z5S9 345 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 C18orf15Q96N68 181 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 CACNA1HO95180 2353 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 IGHV1-3A0A0C4DH29 117 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 TPTE2P1Q5T6R2 138 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 A6NDN8 102 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 H7C1H1 209 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 PYYP10082 97 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 HBBP68871 147 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 REC114Q7Z4M0 266 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 HEPN1Q6WQI6 88 aa15.25■□□□□ 0.03
CLIP2-201ENST00000223398 CIDEAO60543 219 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 C18orf12Q96KH6 178 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 J3QKU1 62 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 CBLN1P23435 193 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 C15orf32Q32M92 178 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 PSMG4Q5JS54 123 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 KLF17Q5JT82 389 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-201ENST00000223398 Q5PR19 223 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 FAM89BQ8N5H3 189 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 SMIM12Q96EX1 92 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 J3QRE1 110 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 TNFRSF14Q92956 283 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 ZNF256Q9Y2P7 627 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-201ENST00000223398 RLFQ13129 1914 aa15.24■□□□□ 0.03
CLIP2-201ENST00000223398 ERVH48-1M5A8F1 160 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 GFI1Q99684 422 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 BIVMQ86UB2 503 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 USF3Q68DE3 2245 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 PVRIGQ6DKI7 326 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 OR10AG1Q8NH19 301 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 GAFA1Q96PS6 74 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 PKDREJQ9NTG1 2253 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 PRCDQ00LT1 54 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 MGAMO43451 1857 aa15.23■□□□□ 0.03
CLIP2-201ENST00000223398 LINC01356Q8N9X3 169 aa15.22■□□□□ 0.03
CLIP2-201ENST00000223398 F11RQ9Y624 299 aaKnown RBP15.22■□□□□ 0.03
CLIP2-201ENST00000223398 TICRRQ7Z2Z1 1910 aa15.22■□□□□ 0.03
CLIP2-201ENST00000223398 PNRC2Q9NPJ4 139 aaKnown RBP15.22■□□□□ 0.03
CLIP2-201ENST00000223398 SRSF7Q16629 238 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLIP2-201ENST00000223398 FBLL1A6NHQ2 334 aaKnown RBP15.22■□□□□ 0.03
CLIP2-201ENST00000223398 OR5AN1Q8NGI8 311 aa15.22■□□□□ 0.03
CLIP2-201ENST00000223398 FMC1Q96HJ9 113 aa15.22■□□□□ 0.03
CLIP2-201ENST00000223398 TOMM7Q9P0U1 55 aa15.22■□□□□ 0.03
CLIP2-201ENST00000223398 TMEM170BQ5T4T1 132 aa15.22■□□□□ 0.03
CLIP2-201ENST00000223398 OR13C6PQ8NH95 151 aa15.22■□□□□ 0.03
CLIP2-201ENST00000223398 LOC107984156A0A0G2JMH3 177 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 DNLZQ5SXM8 178 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 RNF144BQ7Z419 303 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 ARL17AQ8IVW1 177 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 PRELID3AQ96N28 172 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 SLC25A16P16260 332 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 PPIFP30405 207 aaKnown RBP15.21■□□□□ 0.03
CLIP2-201ENST00000223398 NBL1P41271 181 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 RUSC1-AS1Q66K80 236 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 C3orf56Q8N813 242 aa15.21■□□□□ 0.03
CLIP2-201ENST00000223398 ATOH7Q8N100 152 aa15.21■□□□□ 0.02
CLIP2-201ENST00000223398 Q96MF0 132 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 TAS2R60P59551 318 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 RPL15P61313 204 aaKnown RBP15.2■□□□□ 0.02
CLIP2-201ENST00000223398 CIRBPQ14011 172 aaKnown RBP15.2■□□□□ 0.02
CLIP2-201ENST00000223398 GCSAMLQ5JQS6 135 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 OR1P1Q8NH06 330 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 HIST1H4GQ99525 98 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 FBLN5Q9UBX5 448 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 NAT1P18440 290 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 ZNF506Q5JVG8 444 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 FER1L6-AS1Q8NA97 138 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 PAX1P15863 534 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 IFT22Q9H7X7 185 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 TMEM160Q9NX00 188 aa15.2■□□□□ 0.02
CLIP2-201ENST00000223398 HEATR1Q9H583 2144 aaKnown RBP15.2■□□□□ 0.02
CLIP2-201ENST00000223398 SPATA45Q537H7 98 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 TMEM136Q6ZRR5 245 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 SLC50A1Q9BRV3 221 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 CADP27708 2225 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 TMEM250H0YL14 139 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 ATG101Q9BSB4 218 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 KLHL30-AS1Q8NEE0 82 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms