RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LRRC75BQ2VPJ9 315 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 LHFPL4Q7Z7J7 247 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 C11orf53Q8IXP5 236 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 RAB40CQ96S21 281 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 TRAV1-1A0A0B4J248 108 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 HSPA12AO43301 675 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 CST7O76096 145 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 CCL3L1P16619 93 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 SULT1A1P50225 295 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 UBE2E1P51965 193 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 MSMO1Q15800 293 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF674Q2M3X9 581 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 RNF212Q495C1 297 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 HAPLN4Q86UW8 402 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 OR51H1Q8NH63 302 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 C5orf30Q96GV9 206 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 PARD6GQ9BYG4 376 aaPredicted RBP3.85□□□□□ -1.79
LINC00550-201ENST00000629293 SAV1Q9H4B6 383 aaPredicted RBP3.85□□□□□ -1.79
LINC00550-201ENST00000629293 C16orf95Q9H693 158 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 FBXO7Q9Y3I1 522 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 HILPDAQ9Y5L2 63 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 TRAV39A0A0B4J263 110 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 DFFBO76075 338 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 SCAF4O95104 1147 aaKnown RBP3.84□□□□□ -1.79
LINC00550-201ENST00000629293 HAND1O96004 215 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 SERPINE2P07093 398 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 OR8U8P0C7N1 319 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 EGR2P11161 476 aaPredicted RBP3.84□□□□□ -1.79
LINC00550-201ENST00000629293 CD24P25063 80 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 RPL31P62899 125 aaKnown RBP3.84□□□□□ -1.79
LINC00550-201ENST00000629293 RUNX1Q01196 453 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF506Q5JVG8 444 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 NCR3LG1Q68D85 454 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 DRAM1Q8N682 238 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 TNFRSF14Q92956 283 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 MALSU1Q96EH3 234 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 RARRES2Q99969 163 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.79
LINC00550-201ENST00000629293 BIN3Q9NQY0 253 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 COA4Q9NYJ1 87 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 CACNG5Q9UF02 275 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 RYR3Q15413 4870 aa3.84□□□□□ -1.79
LINC00550-201ENST00000629293 RBFOX3A6NFN3 312 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 FAM90A26D6RGX4 464 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 SH2D1BO14796 132 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 NXPH2O95156 264 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 NXPH3O95157 252 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 PTBP3O95758 552 aaKnown RBP3.84□□□□□ -1.8
LINC00550-201ENST00000629293 LHBP01229 141 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 MT-ND4LP03901 98 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 SRP19P09132 144 aaKnown RBP3.84□□□□□ -1.8
LINC00550-201ENST00000629293 MC5RP33032 325 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 CAMPP49913 170 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 EDDM3BP56851 147 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 RPL23AP62750 156 aaKnown RBP3.84□□□□□ -1.8
LINC00550-201ENST00000629293 PAX5Q02548 391 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 ARL16Q0P5N6 197 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 ICAM4Q14773 271 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 IZUMO4Q1ZYL8 232 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 TEX36Q5VZQ5 186 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 STX12Q86Y82 276 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 TMEM217Q8N7C4 229 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 OR4F17Q8NGA8 305 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 IL1F10Q8WWZ1 152 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 CORO2AQ92828 525 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 OR4F4Q96R69 305 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 RPS10P5Q9NQ39 176 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 KAAG1Q9UBP8 84 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 TRAPPC2LQ9UL33 140 aa3.84□□□□□ -1.8
LINC00550-201ENST00000629293 TMEM30CPA0ZSE6 113 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 WRBO00258 174 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 SYNGR2O43760 224 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 HSPB1P04792 205 aaKnown RBP3.83□□□□□ -1.8
LINC00550-201ENST00000629293 IFNA4P05014 189 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 AKR1C3P42330 323 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 SUMO2P61956 95 aaKnown RBP3.83□□□□□ -1.8
LINC00550-201ENST00000629293 BLCAPP62952 87 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 TMEM267Q0VDI3 215 aaPredicted RBP3.83□□□□□ -1.8
LINC00550-201ENST00000629293 STUMQ69YW2 141 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF645Q8N7E2 425 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 OR10G4Q8NGN3 311 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 RBMXL1Q96E39 390 aaKnown RBP3.83□□□□□ -1.8
LINC00550-201ENST00000629293 COQ2Q96H96 371 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 GAFA1Q96PS6 74 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 PSMG3Q9BT73 122 aaPredicted RBP3.83□□□□□ -1.8
LINC00550-201ENST00000629293 C12orf77C9JDV5 145 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 H3BP45 60 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 FSTL3O95633 263 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 HBE1P02100 147 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 ARG1P05089 322 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 SNRNP70P08621 437 aaKnown RBP3.83□□□□□ -1.8
LINC00550-201ENST00000629293 OR3A1P47881 315 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 EDDM3AQ14507 147 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 HAGHQ16775 308 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 ACP7Q6ZNF0 438 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 LY6G5BQ8NDX9 201 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 IGKV1D-17A0A075B6S4 117 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 A0A087WWC5 75 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF98A6NK75 572 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 OR13C7P0DN81 318 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms