RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 J3KRW8 73 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 BMI1P35226 326 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 KIR2DL2P43627 348 aaPredicted RBP10.33□□□□□ -0.76
CDH1-212ENST00000611625 PET117Q6UWS5 81 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 CACNA1HO95180 2353 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
CDH1-212ENST00000611625 CKS2P33552 79 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 TCTAP57738 103 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 SLC25A33Q9BSK2 321 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 ARF6P62330 175 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 RNF115Q9Y4L5 304 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 IGLV3-1P01715 115 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 NMUP48645 174 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 PRCDQ00LT1 54 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 ZNF585BQ52M93 769 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 PNKDQ8N490 385 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 KCNS1Q96KK3 526 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 MRPL37Q9BZE1 423 aaKnown RBP10.32□□□□□ -0.76
CDH1-212ENST00000611625 OSTCQ9NRP0 149 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 ELOVL5Q9NYP7 299 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 IZUMO1RA6ND01 250 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 TIMP3P35625 211 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 FAM19A2Q8N3H0 131 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 TRAV30A0A087WSZ9 112 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 A0A1W2PRE2 83 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 CD69Q07108 199 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 COQ2Q96H96 371 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 TMEM70Q9BUB7 260 aa10.32□□□□□ -0.76
CDH1-212ENST00000611625 WNK2Q9Y3S1 2297 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 C17orf100A8MU93 164 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 IL4P05112 153 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 SELLP14151 372 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 SPANXN1Q5VSR9 72 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 DERL1Q9BUN8 251 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 NRN1Q9NPD7 142 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 LINC00473A8K010 186 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 CD59P13987 128 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 RPL24P83731 157 aaKnown RBP10.31□□□□□ -0.76
CDH1-212ENST00000611625 FBXL15Q9H469 300 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 UBTD1Q9HAC8 227 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 IGKV3-7A0A075B6H7 116 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 RPL7P18124 248 aaKnown RBP10.31□□□□□ -0.76
CDH1-212ENST00000611625 MYO7BQ6PIF6 2116 aa10.31□□□□□ -0.76
CDH1-212ENST00000611625 MDS2Q8NDY4 140 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 GUCD1Q96NT3 240 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 LY6G6EA0A0G2JKS1 128 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 B9A039 149 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 LIPFP07098 398 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 FOXL1Q12952 345 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 CD177Q8N6Q3 437 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 MYOZ3Q8TDC0 251 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 MIEN1Q9BRT3 115 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 PARD6GQ9BYG4 376 aaPredicted RBP10.3□□□□□ -0.76
CDH1-212ENST00000611625 U3KQA8 63 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 PAX9P55771 341 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 BSPH1Q075Z2 132 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 CHODLQ9H9P2 273 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 AP5S1Q9NUS5 200 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 TMEM78Q5T7P6 136 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 C14orf144Q96I85 54 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 GPR82Q96P67 336 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 COL25A1Q9BXS0 654 aaPredicted RBP10.3□□□□□ -0.76
CDH1-212ENST00000611625 RPP21Q9H633 154 aaKnown RBP10.3□□□□□ -0.76
CDH1-212ENST00000611625 LPAR2Q9HBW0 351 aa10.3□□□□□ -0.76
CDH1-212ENST00000611625 C15orf62A8K5M9 175 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 SPATA31B1PQ5VZV4 182 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 LYPD6Q86Y78 171 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 MUC15Q8N387 334 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 MGST2Q99735 147 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
CDH1-212ENST00000611625 PYYP10082 97 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 MBNL2Q5VZF2 373 aaKnown RBP10.29□□□□□ -0.76
CDH1-212ENST00000611625 FAM57AQ8TBR7 257 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 DOCK11Q5JSL3 2073 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 CADP27708 2225 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 LINC00205P59089 165 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 TRAV3A0A0B4J244 114 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 MLNRO43193 412 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 NTF4P34130 210 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 UQCRFS1P47985 274 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 RPS20P60866 119 aaKnown RBP10.29□□□□□ -0.76
CDH1-212ENST00000611625 UNQ5815/PRO19632Q6UWF5 114 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 PRDM13Q9H4Q3 707 aa10.29□□□□□ -0.76
CDH1-212ENST00000611625 RPUSD1Q9UJJ7 312 aaKnown RBP10.29□□□□□ -0.76
CDH1-212ENST00000611625 FOXI3A8MTJ6 420 aaPredicted RBP10.28□□□□□ -0.76
CDH1-212ENST00000611625 FAM106CPP0CH98 169 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 PSG9Q00887 426 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 Q1RN00 199 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 SEPSECSQ9HD40 501 aaKnown RBP10.28□□□□□ -0.76
CDH1-212ENST00000611625 FOXA2Q9Y261 457 aaPredicted RBP10.28□□□□□ -0.76
CDH1-212ENST00000611625 LOC102724200A0A096LPH7 203 aaPredicted RBP10.28□□□□□ -0.76
CDH1-212ENST00000611625 K7ERU9 68 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 APOBEC3AP31941 199 aaPredicted RBP10.28□□□□□ -0.76
CDH1-212ENST00000611625 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 GNB1LQ9BYB4 327 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms