RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 CD69Q07108 199 aa12.1□□□□□ -0.47
HIF3A-218ENST00000600383 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
HIF3A-218ENST00000600383 MRPL41Q8IXM3 137 aaKnown RBP12.1□□□□□ -0.47
HIF3A-218ENST00000600383 MAPK1IP1LQ8NDC0 245 aa12.1□□□□□ -0.47
HIF3A-218ENST00000600383 NPBQ8NG41 125 aa12.1□□□□□ -0.47
HIF3A-218ENST00000600383 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
HIF3A-218ENST00000600383 FAM103A1Q9BTL3 118 aaKnown RBP12.1□□□□□ -0.47
HIF3A-218ENST00000600383 GGTLC1Q9BX51 225 aa12.1□□□□□ -0.47
HIF3A-218ENST00000600383 PXMP4Q9Y6I8 212 aa12.1□□□□□ -0.47
HIF3A-218ENST00000600383 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 TRAV40A0A0B4J280 105 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 MAP1LC3B2A6NCE7 125 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 BTBD17A6NE02 478 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 RBFOX3A6NFN3 312 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 FAM106CPP0CH98 169 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 ADCYAP1P18509 176 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-218ENST00000600383 ACOT6Q3I5F7 207 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-218ENST00000600383 MISP3Q96FF7 219 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 MAP1LC3BQ9GZQ8 125 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 GNG13Q9P2W3 67 aa12.09□□□□□ -0.47
HIF3A-218ENST00000600383 B4DSR2 109 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 CYB5BO43169 146 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 SLC25A16P16260 332 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 BRS3P32247 399 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 FXYD3Q14802 87 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 C5orf64Q2M2E5 130 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 MBD3L1Q8WWY6 194 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 SCRT1Q9BWW7 348 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 ACTR3CQ9C0K3 210 aaPredicted RBP12.08□□□□□ -0.47
HIF3A-218ENST00000600383 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.47
HIF3A-218ENST00000600383 HIF1ANQ9NWT6 349 aa12.08□□□□□ -0.47
HIF3A-218ENST00000600383 IGKV1OR2-108A0A075B7D4 117 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 IGHV3-21A0A0B4J1V1 117 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 ZFP92A6NM28 416 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 TEX22C9J3V5 150 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 NDUFA3O95167 84 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 B2MP61769 119 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 SLC16A13Q7RTY0 426 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 TMEM144Q7Z5S9 345 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 IQCF2Q8IXL9 164 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 RAB24Q969Q5 203 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 SLC35E1Q96K37 410 aa12.08□□□□□ -0.48
HIF3A-218ENST00000600383 ZFHX3Q15911 3703 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 TRAV1-1A0A0B4J248 108 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 YIF1AO95070 293 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 GATA2P23769 480 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-218ENST00000600383 MFAP2P55001 183 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 STPG3Q8N7X2 389 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
HIF3A-218ENST00000600383 CACNG8Q8WXS5 425 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 TMPRSS5Q9H3S3 457 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 IGHV1-69DA0A0B4J2H0 117 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 A0A1W2PPV4 95 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 FNDC10F2Z333 226 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 IGHV1-69P01742 117 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 IGHV4-38-2P0DP08 117 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 OR10J1P30954 320 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 GPX4P36969 197 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-218ENST00000600383 CEBPGP53567 150 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 GUCA2BQ16661 112 aa12.07□□□□□ -0.48
HIF3A-218ENST00000600383 HELZ2Q9BYK8 2649 aaKnown RBP12.07□□□□□ -0.48
HIF3A-218ENST00000600383 CTXND1A0A1B0GTU2 59 aa12.06□□□□□ -0.48
HIF3A-218ENST00000600383 CDC34P49427 236 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-218ENST00000600383 EBI3Q14213 229 aa12.06□□□□□ -0.48
HIF3A-218ENST00000600383 DEFB113Q30KQ7 82 aa12.06□□□□□ -0.48
HIF3A-218ENST00000600383 RXFP4Q8TDU9 374 aa12.06□□□□□ -0.48
HIF3A-218ENST00000600383 NPIPB3Q92617 1050 aa12.06□□□□□ -0.48
HIF3A-218ENST00000600383 SEC11CQ9BY50 192 aa12.06□□□□□ -0.48
HIF3A-218ENST00000600383 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.48
HIF3A-218ENST00000600383 NBPF19A0A087WUL8 3843 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 RNF223E7ERA6 249 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 FBP1P09467 338 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 CTRB1P17538 263 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 CX3CL1P78423 397 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 CTRB2Q6GPI1 263 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 ATRAIDQ6UW56 229 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 Q8N6K4 173 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 SLC25A33Q9BSK2 321 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 RPL29P47914 159 aaKnown RBP12.05□□□□□ -0.48
HIF3A-218ENST00000600383 OR1P1Q8NH06 330 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 WNT10AQ9GZT5 417 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
HIF3A-218ENST00000600383 MRPL36Q9P0J6 103 aaKnown RBP12.05□□□□□ -0.48
HIF3A-218ENST00000600383 SOX21Q9Y651 276 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-218ENST00000600383 ZNF562Q6V9R5 426 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.04□□□□□ -0.48
HIF3A-218ENST00000600383 SLC35B3Q9H1N7 401 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 C1RLQ9NZP8 487 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 SLC45A2Q9UMX9 530 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 F11RQ9Y624 299 aaKnown RBP12.04□□□□□ -0.48
HIF3A-218ENST00000600383 APCP25054 2843 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 A0A0U1RQK1 487 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 SOX15O60248 233 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 AVPP01185 164 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 RND2P52198 227 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 SVBPQ8N300 66 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 ZNF114Q8NC26 417 aa12.04□□□□□ -0.48
HIF3A-218ENST00000600383 SEPSECSQ9HD40 501 aaKnown RBP12.04□□□□□ -0.48
HIF3A-218ENST00000600383 DMRT1Q9Y5R6 373 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms