RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TCTAP57738 103 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 TMEM116Q8NCL8 245 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 OR5H2Q8NGV7 314 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 FCAMRQ8WWV6 532 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 NXF2Q9GZY0 626 aaKnown RBP12.63□□□□□ -0.39
SMG9-210ENST00000600097 FKBP11Q9NYL4 201 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 PRNDQ9UKY0 176 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 PGLYRP1O75594 196 aaPredicted RBP12.62□□□□□ -0.39
SMG9-210ENST00000600097 KRASP01116 189 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 RLN1P04808 185 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
SMG9-210ENST00000600097 DHRS11Q6UWP2 260 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 OR1P1Q8NH06 330 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 DGCR14Q96DF8 476 aaKnown RBP12.62□□□□□ -0.39
SMG9-210ENST00000600097 OR10C1Q96KK4 312 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 EHFQ9NZC4 300 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 KMT2AQ03164 3969 aa12.62□□□□□ -0.39
SMG9-210ENST00000600097 YIF1AO95070 293 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 PMP2P02689 132 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 CD5P06127 495 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 S100A5P33763 92 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 LPAR6P43657 344 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 TFPI2P48307 235 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 NANOS2P60321 138 aaKnown RBP12.61□□□□□ -0.39
SMG9-210ENST00000600097 PAFAH1B2P68402 229 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 IL18Q14116 193 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 ZNF124Q15973 351 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 LYSMD2Q8IV50 215 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 CMTM1Q8IZ96 169 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 MOB3AQ96BX8 217 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 ABHD1Q96SE0 405 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 TXN2Q99757 166 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 NSG2Q9Y328 171 aa12.61□□□□□ -0.39
SMG9-210ENST00000600097 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
SMG9-210ENST00000600097 GABARAPH6UMI1 98 aa12.6□□□□□ -0.39
SMG9-210ENST00000600097 HLA-DMAP28067 261 aa12.6□□□□□ -0.39
SMG9-210ENST00000600097 G6PCP35575 357 aa12.6□□□□□ -0.39
SMG9-210ENST00000600097 RFX2P48378 723 aa12.6□□□□□ -0.39
SMG9-210ENST00000600097 MFAP4P55083 255 aa12.6□□□□□ -0.39
SMG9-210ENST00000600097 TSPAN5P62079 268 aa12.6□□□□□ -0.39
SMG9-210ENST00000600097 SSBP1Q04837 148 aaKnown RBP12.6□□□□□ -0.39
SMG9-210ENST00000600097 OR6F1Q8NGZ6 308 aa12.6□□□□□ -0.39
SMG9-210ENST00000600097 IGKV3-7A0A075B6H7 116 aa12.59□□□□□ -0.39
SMG9-210ENST00000600097 CTDSPLO15194 276 aa12.59□□□□□ -0.39
SMG9-210ENST00000600097 TNFSF8P32971 234 aa12.59□□□□□ -0.39
SMG9-210ENST00000600097 HRH1P35367 487 aa12.59□□□□□ -0.39
SMG9-210ENST00000600097 FAM90A2PQ658T7 463 aa12.59□□□□□ -0.39
SMG9-210ENST00000600097 ZNF414Q96IQ9 312 aa12.59□□□□□ -0.39
SMG9-210ENST00000600097 ZNF2Q9BSG1 426 aaPredicted RBP12.59□□□□□ -0.39
SMG9-210ENST00000600097 TMEM14BQ9NUH8 114 aa12.59□□□□□ -0.39
SMG9-210ENST00000600097 MTFP1Q9UDX5 166 aa12.59□□□□□ -0.39
SMG9-210ENST00000600097 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 FABP12A6NFH5 140 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 C15orf61A6NNL5 157 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 I3L2K1 104 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 CA1P00915 261 aaPredicted RBP12.58□□□□□ -0.4
SMG9-210ENST00000600097 TBPP20226 339 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 TMEM187Q14656 261 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 RNASE12Q5GAN4 147 aaKnown RBP12.58□□□□□ -0.4
SMG9-210ENST00000600097 GBGT1Q8N5D6 347 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 OR52I2Q8NH67 350 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 MISP3Q96FF7 219 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 GINS3Q9BRX5 216 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 KLK11Q9UBX7 282 aa12.58□□□□□ -0.4
SMG9-210ENST00000600097 HERC2O95714 4834 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 GPR31O00270 319 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 DFFBO76075 338 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 TAS2R19P59542 299 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 PRR20EP86478 221 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 PRR20CP86479 221 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 PRR20DP86480 221 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 PRR20BP86481 221 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 PRR20AP86496 221 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 LPCAT3Q6P1A2 487 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
SMG9-210ENST00000600097 FAM212BQ9NTI7 297 aaPredicted RBP12.57□□□□□ -0.4
SMG9-210ENST00000600097 DBX1A6NMT0 343 aa12.56□□□□□ -0.4
SMG9-210ENST00000600097 C11orf94C9JXX5 98 aa12.56□□□□□ -0.4
SMG9-210ENST00000600097 GNG7O60262 68 aa12.56□□□□□ -0.4
SMG9-210ENST00000600097 S100GP29377 79 aa12.56□□□□□ -0.4
SMG9-210ENST00000600097 RNASE10Q5GAN6 216 aaKnown RBP12.56□□□□□ -0.4
SMG9-210ENST00000600097 TMEM229BQ8NBD8 167 aa12.56□□□□□ -0.4
SMG9-210ENST00000600097 ZNF114Q8NC26 417 aa12.56□□□□□ -0.4
SMG9-210ENST00000600097 SMIM4Q8WVI0 70 aa12.56□□□□□ -0.4
SMG9-210ENST00000600097 IGHV3OR16-13A0A075B7E8 117 aa12.55□□□□□ -0.4
SMG9-210ENST00000600097 IGHV3-74A0A0B4J1X5 117 aa12.55□□□□□ -0.4
SMG9-210ENST00000600097 TRAV2A0A0B4J234 112 aa12.55□□□□□ -0.4
SMG9-210ENST00000600097 DNASE2O00115 360 aaPredicted RBP12.55□□□□□ -0.4
SMG9-210ENST00000600097 MT-CO2P00403 227 aa12.55□□□□□ -0.4
SMG9-210ENST00000600097 OR4A16Q8NH70 328 aa12.55□□□□□ -0.4
SMG9-210ENST00000600097 HRH4Q9H3N8 390 aa12.55□□□□□ -0.4
SMG9-210ENST00000600097 VSIRQ9H7M9 311 aa12.55□□□□□ -0.4
SMG9-210ENST00000600097 DEFB4AO15263 64 aa12.54□□□□□ -0.4
SMG9-210ENST00000600097 ST8SIA3O43173 380 aa12.54□□□□□ -0.4
SMG9-210ENST00000600097 GSTZ1O43708 216 aaPredicted RBP12.54□□□□□ -0.4
SMG9-210ENST00000600097 CD3DP04234 171 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms