RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 C12orf45Q8N5I9 185 aaPredicted RBP15.63■□□□□ 0.09
PNKP-211ENST00000598020 MCRIP2Q9BUT9 160 aaKnown RBP15.63■□□□□ 0.09
PNKP-211ENST00000598020 HEYLQ9NQ87 328 aaPredicted RBP15.63■□□□□ 0.09
PNKP-211ENST00000598020 CMYA5Q8N3K9 4069 aa15.63■□□□□ 0.09
PNKP-211ENST00000598020 I3L2K1 104 aa15.62■□□□□ 0.09
PNKP-211ENST00000598020 CORTO00230 105 aa15.62■□□□□ 0.09
PNKP-211ENST00000598020 HOXD3P31249 432 aaPredicted RBP15.62■□□□□ 0.09
PNKP-211ENST00000598020 SCARB1Q8WTV0 552 aa15.62■□□□□ 0.09
PNKP-211ENST00000598020 HIPK2Q9H2X6 1198 aa15.62■□□□□ 0.09
PNKP-211ENST00000598020 RBKSQ9H477 322 aa15.62■□□□□ 0.09
PNKP-211ENST00000598020 MPTX1A8MV57 137 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 BMPR1BO00238 502 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 MED6O75586 246 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 PTTG1O95997 202 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 SLURP1P55000 103 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 ATP5IP56385 69 aaPredicted RBP15.61■□□□□ 0.09
PNKP-211ENST00000598020 ID3Q02535 119 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 KLF5Q13887 457 aaPredicted RBP15.61■□□□□ 0.09
PNKP-211ENST00000598020 C2orf83Q53S99 150 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 DTD1Q8TEA8 209 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 DCUN1D4Q92564 292 aa15.61■□□□□ 0.09
PNKP-211ENST00000598020 DLX4Q92988 240 aaPredicted RBP15.61■□□□□ 0.09
PNKP-211ENST00000598020 GPN1Q9HCN4 374 aaPredicted RBP15.61■□□□□ 0.09
PNKP-211ENST00000598020 NBEAL1Q6ZS30 2694 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 SNRPGP15A8MWD9 76 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 NXPH3O95157 252 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 FCGR2BP31994 310 aaPredicted RBP15.6■□□□□ 0.09
PNKP-211ENST00000598020 SAMD5Q5TGI4 173 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 CLEC19AQ6UXS0 136 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 NOXA1Q86UR1 476 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 SLC24A4Q8NFF2 622 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 OR4D5Q8NGN0 318 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 MISP3Q96FF7 219 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 OR10C1Q96KK4 312 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 C21orf62Q9NYP8 219 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 S4R3C0 116 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 U3KQ87 197 aa15.6■□□□□ 0.09
PNKP-211ENST00000598020 OVOL1O14753 267 aa15.59■□□□□ 0.09
PNKP-211ENST00000598020 GGCTO75223 188 aaKnown RBP15.59■□□□□ 0.09
PNKP-211ENST00000598020 LY86O95711 162 aa15.59■□□□□ 0.09
PNKP-211ENST00000598020 IGHV3-23P01764 117 aa15.59■□□□□ 0.09
PNKP-211ENST00000598020 CLEC3BP05452 202 aa15.59■□□□□ 0.09
PNKP-211ENST00000598020 RPEL1Q2QD12 228 aa15.59■□□□□ 0.09
PNKP-211ENST00000598020 TXN2Q99757 166 aa15.59■□□□□ 0.09
PNKP-211ENST00000598020 GPR61Q9BZJ8 451 aa15.59■□□□□ 0.09
PNKP-211ENST00000598020 NOTCH1P46531 2555 aa15.58■□□□□ 0.09
PNKP-211ENST00000598020 WIPF1O43516 503 aa15.58■□□□□ 0.08
PNKP-211ENST00000598020 SYNGR2O43760 224 aa15.58■□□□□ 0.08
PNKP-211ENST00000598020 MT-CO2P00403 227 aa15.58■□□□□ 0.08
PNKP-211ENST00000598020 IGLL1P15814 213 aa15.58■□□□□ 0.08
PNKP-211ENST00000598020 SPNP16150 400 aa15.58■□□□□ 0.08
PNKP-211ENST00000598020 DCTN2Q13561 401 aaKnown RBP15.58■□□□□ 0.08
PNKP-211ENST00000598020 IAH1Q2TAA2 248 aaPredicted RBP15.58■□□□□ 0.08
PNKP-211ENST00000598020 TMEM170AQ8WVE7 144 aa15.58■□□□□ 0.08
PNKP-211ENST00000598020 CIB3Q96Q77 187 aaPredicted RBP15.58■□□□□ 0.08
PNKP-211ENST00000598020 GAR1Q9NY12 217 aaKnown RBP15.58■□□□□ 0.08
PNKP-211ENST00000598020 PPP5D1E7EU14 171 aa15.57■□□□□ 0.08
PNKP-211ENST00000598020 F8W735 103 aaPredicted RBP15.57■□□□□ 0.08
PNKP-211ENST00000598020 NPY1RP25929 384 aa15.57■□□□□ 0.08
PNKP-211ENST00000598020 ARL3P36405 182 aa15.57■□□□□ 0.08
PNKP-211ENST00000598020 SPSB3Q6PJ21 355 aa15.57■□□□□ 0.08
PNKP-211ENST00000598020 GPHB5Q86YW7 130 aa15.57■□□□□ 0.08
PNKP-211ENST00000598020 ZBTB8BQ8NAP8 495 aaPredicted RBP15.57■□□□□ 0.08
PNKP-211ENST00000598020 RNASEH2CQ8TDP1 164 aaKnown RBP15.57■□□□□ 0.08
PNKP-211ENST00000598020 BSCL2Q96G97 398 aaPredicted RBP15.57■□□□□ 0.08
PNKP-211ENST00000598020 IGHV3-21A0A0B4J1V1 117 aa15.56■□□□□ 0.08
PNKP-211ENST00000598020 GPR183P32249 361 aa15.56■□□□□ 0.08
PNKP-211ENST00000598020 NKX2-1P43699 371 aaPredicted RBP15.56■□□□□ 0.08
PNKP-211ENST00000598020 MFAP4P55083 255 aa15.56■□□□□ 0.08
PNKP-211ENST00000598020 TATDN3Q17R31 274 aa15.56■□□□□ 0.08
PNKP-211ENST00000598020 OXLD1Q5BKU9 147 aa15.56■□□□□ 0.08
PNKP-211ENST00000598020 KPRPQ5T749 579 aaPredicted RBP15.56■□□□□ 0.08
PNKP-211ENST00000598020 C11orf87Q6NUJ2 197 aa15.56■□□□□ 0.08
PNKP-211ENST00000598020 C1QL4Q86Z23 238 aa15.56■□□□□ 0.08
PNKP-211ENST00000598020 UXS1Q8NBZ7 420 aa15.56■□□□□ 0.08
PNKP-211ENST00000598020 PINX1Q96BK5 328 aaKnown RBP15.56■□□□□ 0.08
PNKP-211ENST00000598020 FBN3Q75N90 2809 aa15.55■□□□□ 0.08
PNKP-211ENST00000598020 G3V4G9 280 aa15.55■□□□□ 0.08
PNKP-211ENST00000598020 TGOLN2O43493 480 aa15.55■□□□□ 0.08
PNKP-211ENST00000598020 IFNA10P01566 189 aa15.55■□□□□ 0.08
PNKP-211ENST00000598020 C9orf66Q5T8R8 295 aa15.55■□□□□ 0.08
PNKP-211ENST00000598020 ACSM6Q6P461 480 aa15.55■□□□□ 0.08
PNKP-211ENST00000598020 MAGT1Q9H0U3 335 aa15.55■□□□□ 0.08
PNKP-211ENST00000598020 FNDC4Q9H6D8 234 aaPredicted RBP15.55■□□□□ 0.08
PNKP-211ENST00000598020 SEC14L6B5MCN3 397 aa15.54■□□□□ 0.08
PNKP-211ENST00000598020 LGALS9O00182 355 aa15.54■□□□□ 0.08
PNKP-211ENST00000598020 CCSO14618 274 aa15.54■□□□□ 0.08
PNKP-211ENST00000598020 OR2C1O95371 312 aa15.54■□□□□ 0.08
PNKP-211ENST00000598020 INSL3P51460 131 aa15.54■□□□□ 0.08
PNKP-211ENST00000598020 SYNJ2BPP57105 145 aa15.54■□□□□ 0.08
PNKP-211ENST00000598020 OR9G4Q8NGQ1 327 aa15.54■□□□□ 0.08
PNKP-211ENST00000598020 RPS10-NUDT3A0A1W2PQS6 291 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 C7orf66A4D0T2 115 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 OR2T8A6NH00 312 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 CTSGP08311 255 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 OPRK1P41145 380 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 NPBWR1P48145 328 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 RPP30P78346 268 aaKnown RBP15.53■□□□□ 0.08
PNKP-211ENST00000598020 BEAN1Q3B7T3 259 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 Q56UQ5 140 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms