RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 LYSMD4Q5XG99 296 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 TMEM42Q69YG0 159 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 LINC00696Q6ZRV3 163 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 ARPC1AQ92747 370 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 TAF15Q92804 592 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 A0A087WX48 190 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 FCGR2BP31994 310 aaPredicted RBP10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 MKXQ8IYA7 352 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 OR10G9Q8NGN4 311 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 OR10G7Q8NGN6 311 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 C1RLQ9NZP8 487 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 LINC00312Q9Y6C7 94 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 KIR2DS1A0A191URI9 304 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 UBE2L5PA0A1B0GUS4 154 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 KLF7O75840 302 aaPredicted RBP10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 APCSP02743 223 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 KIR2DS4P43632 304 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 HBG1P69891 147 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 HBG2P69892 147 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 KIR2DS1Q14954 304 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 TIMM23BQ5SRD1 257 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 IMMP1LQ96LU5 166 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 C5orf49A4QMS7 147 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 MRPL33O75394 65 aaKnown RBP10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 RFPL3SP0C7P2 107 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 MGST1P10620 155 aaKnown RBP10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 CX3CL1P78423 397 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 DAZAP1Q96EP5 407 aaKnown RBP10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 HS3ST6Q96QI5 342 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 OR4C12Q96R67 309 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 TM2D2Q9BX73 214 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 CDIP1Q9H305 208 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 GCM1Q9NP62 436 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 LOC102723996A0A087X1L8 192 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 IAPPP10997 89 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 PRTN3P24158 256 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 FOLR3P41439 243 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 NMSQ5H8A3 153 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 Q6ZUT4 128 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 SYT8Q8NBV8 401 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 PTH2Q96A98 100 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 R4GN57 208 aa10.13□□□□□ -0.79
SMARCA4-217ENST00000591595 GAGE12JA6NER3 117 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 GAGE7O76087 117 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 PLP2Q04941 152 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 GAGE4Q13068 117 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 GCSAMQ8N6F7 178 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 UBALD1Q8TB05 177 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 WDFY3Q8IZQ1 3526 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 DOCK7Q96N67 2140 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 AMY1AP04745 511 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 TIGITQ495A1 244 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 ZNF295-AS1Q8N0V1 137 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 OSR1Q8TAX0 266 aaPredicted RBP10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 ZNF488Q96MN9 340 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 TNFRSF19Q9NS68 423 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 KCNS2Q9ULS6 477 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 FAM90A27PA6NNH2 459 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 FABP5P3A8MUU1 101 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 TGFAP01135 160 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 XGP55808 180 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 SLC35E4Q6ICL7 350 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 ZDHHC23Q8IYP9 409 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 RAB40CQ96S21 281 aa10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 CSDC2Q9Y534 153 aaKnown RBP10.12□□□□□ -0.79
SMARCA4-217ENST00000591595 hADV38S2A0JD32 116 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 C3orf80F5H4A9 247 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 KLRD1Q13241 179 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 IL11RAQ14626 422 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 ANXA2RQ3ZCQ2 193 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 ZBTB34Q8NCN2 500 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 GLMPQ8WWB7 406 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 PRRG4Q9BZD6 226 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 RABAC1Q9UI14 185 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 TRGV10A0A0A0MS01 117 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 K7EN84 100 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 SAP25Q8TEE9 199 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 TECRQ9NZ01 308 aaKnown RBP10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 LY6G6EA0A0G2JKS1 128 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 CD300LBA8K4G0 201 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 DNPH1O43598 174 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 PGLYRP1O75594 196 aaPredicted RBP10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 FGF12P61328 243 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 OR1A1Q9P1Q5 309 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 CACNG5Q9UF02 275 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 OR2W1Q9Y3N9 320 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 TIMM9Q9Y5J7 89 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 U3KQA8 63 aa10.11□□□□□ -0.79
SMARCA4-217ENST00000591595 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 IGHV3-7P01780 117 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 NHLRC4P0CG21 123 aaPredicted RBP10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 GGNQ86UU5 652 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 ATP23Q9Y6H3 246 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 V9GYV3 84 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 FREM1Q5H8C1 2179 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms