RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PRAF2O60831 178 aa13.26□□□□□ -0.29
LITAF-212ENST00000573332 HOXD3P31249 432 aaPredicted RBP13.26□□□□□ -0.29
LITAF-212ENST00000573332 SLURP1P55000 103 aa13.26□□□□□ -0.29
LITAF-212ENST00000573332 KLF5Q13887 457 aaPredicted RBP13.26□□□□□ -0.29
LITAF-212ENST00000573332 SAMD5Q5TGI4 173 aa13.26□□□□□ -0.29
LITAF-212ENST00000573332 DCUN1D4Q92564 292 aa13.26□□□□□ -0.29
LITAF-212ENST00000573332 DLX4Q92988 240 aaPredicted RBP13.26□□□□□ -0.29
LITAF-212ENST00000573332 HIPK2Q9H2X6 1198 aa13.26□□□□□ -0.29
LITAF-212ENST00000573332 RBKSQ9H477 322 aa13.26□□□□□ -0.29
LITAF-212ENST00000573332 INMT-MINDY4F8WBC2 141 aa13.25□□□□□ -0.29
LITAF-212ENST00000573332 CORTO00230 105 aa13.25□□□□□ -0.29
LITAF-212ENST00000573332 BMPR1BO00238 502 aa13.25□□□□□ -0.29
LITAF-212ENST00000573332 FCGR2BP31994 310 aaPredicted RBP13.25□□□□□ -0.29
LITAF-212ENST00000573332 ATP5IP56385 69 aaPredicted RBP13.25□□□□□ -0.29
LITAF-212ENST00000573332 ID3Q02535 119 aa13.25□□□□□ -0.29
LITAF-212ENST00000573332 C2orf83Q53S99 150 aa13.25□□□□□ -0.29
LITAF-212ENST00000573332 C12orf45Q8N5I9 185 aaPredicted RBP13.25□□□□□ -0.29
LITAF-212ENST00000573332 DTD1Q8TEA8 209 aa13.25□□□□□ -0.29
LITAF-212ENST00000573332 SCARB1Q8WTV0 552 aa13.25□□□□□ -0.29
LITAF-212ENST00000573332 GPR61Q9BZJ8 451 aa13.25□□□□□ -0.29
LITAF-212ENST00000573332 GPN1Q9HCN4 374 aaPredicted RBP13.25□□□□□ -0.29
LITAF-212ENST00000573332 MPTX1A8MV57 137 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 SNRPGP15A8MWD9 76 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 OVOL1O14753 267 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 WIPF1O43516 503 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 GGCTO75223 188 aaKnown RBP13.24□□□□□ -0.29
LITAF-212ENST00000573332 MED6O75586 246 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 NXPH3O95157 252 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 IGLL1P15814 213 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 CLEC19AQ6UXS0 136 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 NOXA1Q86UR1 476 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 SLC24A4Q8NFF2 622 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 OR4D5Q8NGN0 318 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 MISP3Q96FF7 219 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 TXN2Q99757 166 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 C21orf62Q9NYP8 219 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 S4R3C0 116 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 U3KQ87 197 aa13.24□□□□□ -0.29
LITAF-212ENST00000573332 LY86O95711 162 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 PTTG1O95997 202 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 MT-CO2P00403 227 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 IGHV3-23P01764 117 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 CLEC3BP05452 202 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 TATDN3Q17R31 274 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 RPEL1Q2QD12 228 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 OXLD1Q5BKU9 147 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 OR10C1Q96KK4 312 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 GAR1Q9NY12 217 aaKnown RBP13.23□□□□□ -0.29
LITAF-212ENST00000573332 CMYA5Q8N3K9 4069 aa13.23□□□□□ -0.29
LITAF-212ENST00000573332 F8W735 103 aaPredicted RBP13.22□□□□□ -0.29
LITAF-212ENST00000573332 G3V4G9 280 aa13.22□□□□□ -0.29
LITAF-212ENST00000573332 SYNGR2O43760 224 aa13.22□□□□□ -0.29
LITAF-212ENST00000573332 NPY1RP25929 384 aa13.22□□□□□ -0.29
LITAF-212ENST00000573332 ARL3P36405 182 aa13.22□□□□□ -0.29
LITAF-212ENST00000573332 IAH1Q2TAA2 248 aaPredicted RBP13.22□□□□□ -0.29
LITAF-212ENST00000573332 KPRPQ5T749 579 aaPredicted RBP13.22□□□□□ -0.29
LITAF-212ENST00000573332 GPHB5Q86YW7 130 aa13.22□□□□□ -0.29
LITAF-212ENST00000573332 RNASEH2CQ8TDP1 164 aaKnown RBP13.22□□□□□ -0.29
LITAF-212ENST00000573332 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
LITAF-212ENST00000573332 BSCL2Q96G97 398 aaPredicted RBP13.22□□□□□ -0.29
LITAF-212ENST00000573332 CIB3Q96Q77 187 aaPredicted RBP13.22□□□□□ -0.29
LITAF-212ENST00000573332 PPP5D1E7EU14 171 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 TGOLN2O43493 480 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 GPR183P32249 361 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 NKX2-1P43699 371 aaPredicted RBP13.21□□□□□ -0.29
LITAF-212ENST00000573332 INSL3P51460 131 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 MFAP4P55083 255 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 ACSM6Q6P461 480 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 SPSB3Q6PJ21 355 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 C1QL4Q86Z23 238 aa13.21□□□□□ -0.29
LITAF-212ENST00000573332 ZBTB8BQ8NAP8 495 aaPredicted RBP13.21□□□□□ -0.29
LITAF-212ENST00000573332 IGHV3-21A0A0B4J1V1 117 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 SEC14L6B5MCN3 397 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 LGALS9O00182 355 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 OR2C1O95371 312 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 IFNA10P01566 189 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 SPNP16150 400 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 DCTN2Q13561 401 aaKnown RBP13.2□□□□□ -0.3
LITAF-212ENST00000573332 BEAN1Q3B7T3 259 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 C11orf87Q6NUJ2 197 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 UXS1Q8NBZ7 420 aa13.2□□□□□ -0.3
LITAF-212ENST00000573332 PINX1Q96BK5 328 aaKnown RBP13.2□□□□□ -0.3
LITAF-212ENST00000573332 FNDC4Q9H6D8 234 aaPredicted RBP13.2□□□□□ -0.3
LITAF-212ENST00000573332 RPS10-NUDT3A0A1W2PQS6 291 aa13.19□□□□□ -0.3
LITAF-212ENST00000573332 NPBWR1P48145 328 aa13.19□□□□□ -0.3
LITAF-212ENST00000573332 REC114Q7Z4M0 266 aa13.19□□□□□ -0.3
LITAF-212ENST00000573332 OR9G4Q8NGQ1 327 aa13.19□□□□□ -0.3
LITAF-212ENST00000573332 C2orf50Q96LR7 162 aa13.19□□□□□ -0.3
LITAF-212ENST00000573332 SIGLEC8Q9NYZ4 499 aa13.19□□□□□ -0.3
LITAF-212ENST00000573332 C7orf66A4D0T2 115 aa13.18□□□□□ -0.3
LITAF-212ENST00000573332 OR2T8A6NH00 312 aa13.18□□□□□ -0.3
LITAF-212ENST00000573332 CCSO14618 274 aa13.18□□□□□ -0.3
LITAF-212ENST00000573332 CTSGP08311 255 aa13.18□□□□□ -0.3
LITAF-212ENST00000573332 IAPPP10997 89 aa13.18□□□□□ -0.3
LITAF-212ENST00000573332 ADMP35318 185 aa13.18□□□□□ -0.3
LITAF-212ENST00000573332 OPRK1P41145 380 aa13.18□□□□□ -0.3
LITAF-212ENST00000573332 POLR2GP62487 172 aaKnown RBP eCLIP13.18□□□□□ -0.3
LITAF-212ENST00000573332 RPP30P78346 268 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms