RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 HIST1H2BBP33778 126 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 HIST1H2BDP58876 126 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 CNBPP62633 177 aaKnown RBP0.1□□□□□ -2.39
NAE1-211ENST00000563253 HIST1H2BCP62807 126 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 SKP1P63208 163 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 IFITM2Q01629 132 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 RHEBQ15382 184 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 HIST2H2BEQ16778 126 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 SPANXN3Q5MJ09 141 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.1□□□□□ -2.39
NAE1-211ENST00000563253 LPCAT4Q643R3 524 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 CLECL1Q8IZS7 167 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 SFT2D1Q8WV19 159 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 HIST1H2BHQ93079 126 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 HIST1H2BNQ99877 126 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 HIST1H2BMQ99879 126 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 WDR61Q9GZS3 305 aaKnown RBP0.1□□□□□ -2.39
NAE1-211ENST00000563253 RASL12Q9NYN1 266 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 TAS2R4Q9NYW5 299 aa0.1□□□□□ -2.39
NAE1-211ENST00000563253 SONP18583 2426 aaKnown RBP0.1□□□□□ -2.39
NAE1-211ENST00000563253 NCOR1O75376 2440 aa0.09□□□□□ -2.39
NAE1-211ENST00000563253 RP1P56715 2156 aa0.09□□□□□ -2.39
NAE1-211ENST00000563253 DICER1Q9UPY3 1922 aaKnown RBP0.09□□□□□ -2.39
NAE1-211ENST00000563253 A0A0D9SG52 128 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 INMT-MINDY4F8WBC2 141 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 CALUO43852 315 aaPredicted RBP0.09□□□□□ -2.4
NAE1-211ENST00000563253 APOEP02649 317 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 PRH1P02810 166 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 EFNA4P52798 201 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 DEFA1P59665 94 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 HBA1P69905 142 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 CCL20P78556 96 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 RHOGP84095 191 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 PDE6HQ13956 83 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 MPV17LQ2QL34 196 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 SPRNQ5BIV9 151 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 CLVS2Q5SYC1 327 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 RPL22L1Q6P5R6 122 aaKnown RBP0.09□□□□□ -2.4
NAE1-211ENST00000563253 PLEKHG7Q6ZR37 379 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 DEFB128Q7Z7B8 93 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 Q8N402 240 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 TMEM156Q8N614 296 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 DEFB125Q8N687 156 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 GPR32P1Q8NGA4 272 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 PFN4Q8NHR9 129 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 IMP4Q96G21 291 aaKnown RBP0.09□□□□□ -2.4
NAE1-211ENST00000563253 SMR3AQ99954 134 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 DRC3Q9H069 523 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 FGFR1OP2Q9NVK5 253 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 CMTM6Q9NX76 183 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 C3orf18Q9UK00 162 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 EVC2Q86UK5 1308 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 NCOR2Q9Y618 2525 aa0.09□□□□□ -2.4
NAE1-211ENST00000563253 MED12LQ86YW9 2145 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 CACNA1EQ15878 2313 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 ZNF736B4DX44 427 aaPredicted RBP0.08□□□□□ -2.4
NAE1-211ENST00000563253 M0QZ92 97 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 M0R2N4 97 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 KCNK1O00180 336 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 CXCR6O00574 342 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 KLF7O75840 302 aaPredicted RBP0.08□□□□□ -2.4
NAE1-211ENST00000563253 PROSCO94903 275 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 IGKV1-5P01602 117 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 COX5BP10606 129 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 MYL12AP19105 171 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 PSMB6P28072 239 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 MARCKSL1P49006 195 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 TCL1AP56279 114 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 MLLT11Q13015 90 aaPredicted RBP0.08□□□□□ -2.4
NAE1-211ENST00000563253 C1orf137Q5JT78 98 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 FAM74A1Q5RGS3 127 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 HIST2H3PS2Q5TEC6 136 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 SOSTDC1Q6X4U4 206 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 Q6ZS49 121 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 MIR17HGQ75NE6 70 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 MRPL30Q8TCC3 161 aaKnown RBP0.08□□□□□ -2.4
NAE1-211ENST00000563253 TMEM70Q9BUB7 260 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 C6orf62Q9GZU0 229 aaPredicted RBP0.08□□□□□ -2.4
NAE1-211ENST00000563253 TLNRD1Q9H1K6 362 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 OR51I1Q9H343 314 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 C10orf95Q9H7T3 257 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 SLC39A9Q9NUM3 307 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 TP73-AS1Q9UF72 201 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 GREB1Q4ZG55 1949 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 EXPH5Q8NEV8 1989 aa0.08□□□□□ -2.4
NAE1-211ENST00000563253 MTUS2Q5JR59 1369 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 RIC1Q4ADV7 1423 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 USH2AO75445 5202 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 TRAV12-1A0A0B4J245 112 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 A0A1B0GV50 99 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 H0Y980 276 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 GOLGA6L19H0YKK7 550 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 INE1O15225 51 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 CCL25O15444 150 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 LYZL6O75951 148 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 KRT75O95678 551 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 TCL1BO95988 128 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 TNNC2P02585 160 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 BAALC-AS2P0C853 105 aa0.07□□□□□ -2.4
NAE1-211ENST00000563253 MIFP14174 115 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms