RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 OR11H2Q8NH07 326 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 CMTM2Q8TAZ6 248 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 FAM213BQ8TBF2 198 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 SKA2Q8WVK7 121 aaPredicted RBP1.99□□□□□ -2.09
VPS13C-208ENST00000559119 FAM3CQ92520 227 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 PSMF1Q92530 271 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 RAB8BQ92930 207 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 APH1AQ96BI3 265 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 GPX7Q96SL4 187 aaPredicted RBP1.99□□□□□ -2.09
VPS13C-208ENST00000559119 SIGMAR1Q99720 223 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 KLHDC3Q9BQ90 382 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 NUDT9Q9BW91 350 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 LPAR5Q9H1C0 372 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 OR51I2Q9H344 312 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 C11orf1Q9H5F2 150 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 MANBALQ9NQG1 85 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 SPANXA1Q9NS26 97 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM38BQ9NVV0 291 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 MED31Q9Y3C7 131 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 RHBDD3Q9Y3P4 386 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 OR51B2Q9Y5P1 312 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM14AQ9Y6G1 99 aa1.99□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF106Q9H2Y7 1883 aaKnown RBP1.99□□□□□ -2.09
VPS13C-208ENST00000559119 SCN8AQ9UQD0 1980 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 NSG1A0A0A6YYJ2 146 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TRBV9A0A0B4J1U6 114 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 DUXBA0A1W2PPF3 345 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 MEIS3P1A6NDR6 274 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 CRYM-AS1A6NIL9 109 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM14DPA8MWL7 114 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 H7BYZ3 331 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TAX1BP3O14907 124 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 HCRTR1O43613 425 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 NDUFB2O95178 105 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TSPAN13O95857 204 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 MT-CO2P00403 227 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 IFNA1P01562 189 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 IGHG4P01861 327 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 HLA-HP01893 362 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 HLA-DRB1P01911 266 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 CATP04040 527 aaKnown RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 IGF1P05019 195 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 ISG15P05161 165 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 DBIP07108 87 aaKnown RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 GPX1P07203 203 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 IGLC1P0CG04 106 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 BCL2P10415 239 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 ATP1B2P14415 290 aaPredicted RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 KITLGP21583 273 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 AK4P27144 223 aaPredicted RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 ATP6V0CP27449 155 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 HRH1P35367 487 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 GPR6P46095 362 aaPredicted RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 GALR1P47211 349 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 NPBWR2P48146 333 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 CYB561P49447 251 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 CLDN6P56747 220 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 RAB38P57729 211 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TAS2R46P59540 309 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TAS2R30P59541 319 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 S100A10P60903 97 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TBPL1P62380 186 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 RHOBP62745 196 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 CCL7P80098 99 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 QRFPP83859 136 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 SERF2P84101 59 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR1Q1Q15612 314 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 MSMO1Q15800 293 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 HIST3H3Q16695 136 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 HNRNPA1L2Q32P51 320 aaKnown RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 ARHGAP11BQ3KRB8 267 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR10J3Q5JRS4 329 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 LINC01590Q5TEZ4 76 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 MRPL54Q6P161 138 aaKnown RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF880Q6PDB4 577 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 UNQ5815/PRO19632Q6UWF5 114 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 FAM151BQ6UXP7 276 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 ASCL4Q6XD76 172 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 Q6ZN92 141 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 GTF2H5Q6ZYL4 71 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 MRPL21Q7Z2W9 205 aaKnown RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 UBALD2Q8IYN6 164 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM123Q8N131 208 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF676Q8N7Q3 588 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 FER1L6-AS1Q8NA97 138 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR52R1Q8NGF1 315 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR5D13Q8NGL4 314 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR4P4Q8NGL7 312 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR13C9Q8NGT0 318 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR2G3Q8NGZ4 309 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR4K13Q8NH42 304 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 OR1F12Q8NHA8 337 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 FNDC9Q8TBE3 224 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 SLC25A40Q8TBP6 338 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 DOK4Q8TEW6 326 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TSEN15Q8WW01 171 aaKnown RBP1.98□□□□□ -2.09
VPS13C-208ENST00000559119 SFRP2Q96HF1 295 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 Q96M85 177 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF681Q96N22 645 aa1.98□□□□□ -2.09
VPS13C-208ENST00000559119 TSPAN32Q96QS1 320 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms