RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 MUC7Q8TAX7 377 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 CLUHP3Q96NS8 147 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 RCHY1Q96PM5 261 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 SLC35B3Q9H1N7 401 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 IFT22Q9H7X7 185 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 C15orf65H3BRN8 121 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 SLC31A2O15432 143 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 PITX3O75364 302 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 SAP30O75446 220 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 IGHG4P01861 327 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 OR8U9P0C7N5 309 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 UCP1P25874 307 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 INSL3P51460 131 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 CFHR3Q02985 330 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 ZNF616Q08AN1 781 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 FHL3Q13643 280 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 RHEBQ15382 184 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 SLC25A48Q6ZT89 311 aaKnown RBP6.88□□□□□ -1.31
TDP1-208ENST00000553989 RNF152Q8N8N0 203 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 C8orf31Q8N9H6 132 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 RBMXL1Q96E39 390 aaKnown RBP6.88□□□□□ -1.31
TDP1-208ENST00000553989 RAB40CQ96S21 281 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 EIF5A2Q9GZV4 153 aaKnown RBP6.88□□□□□ -1.31
TDP1-208ENST00000553989 SAV1Q9H4B6 383 aaPredicted RBP6.88□□□□□ -1.31
TDP1-208ENST00000553989 RNF150Q9ULK6 438 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 RCL1Q9Y2P8 373 aaKnown RBP6.88□□□□□ -1.31
TDP1-208ENST00000553989 WSB1Q9Y6I7 421 aa6.88□□□□□ -1.31
TDP1-208ENST00000553989 C12orf77C9JDV5 145 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 H0Y980 276 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 WRBO00258 174 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 OVOL1O14753 267 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 ATP6V0E1O15342 81 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 IFNA5P01569 189 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 IGF1P05019 195 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 RCC1P18754 421 aaPredicted RBP6.87□□□□□ -1.31
TDP1-208ENST00000553989 PSMB8P28062 276 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 MAS1LP35410 378 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 NPBWR1P48145 328 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 EWSR1Q01844 656 aaKnown RBP eCLIP6.87□□□□□ -1.31
TDP1-208ENST00000553989 ECSCRQ19T08 205 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 Q3ZCU0 254 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 SOHLH1Q5JUK2 328 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 CASC10Q5T4H9 136 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 ZNF880Q6PDB4 577 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 TMEM88Q6PEY1 159 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 ZNF497Q6ZNH5 498 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 MOB1BQ7L9L4 216 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 TBC1D26Q86UD7 250 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 ZNF429Q86V71 674 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 FAM219AQ8IW50 185 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 ZBTB34Q8NCN2 500 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 OR2G3Q8NGZ4 309 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 OR1L1Q8NH94 360 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 LSM10Q969L4 123 aaKnown RBP6.87□□□□□ -1.31
TDP1-208ENST00000553989 ST6GALNAC6Q969X2 333 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 UBE2E2Q96LR5 201 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 ZNF251Q9BRH9 671 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 SMIM3Q9BZL3 60 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 C11orf1Q9H5F2 150 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 ZMAT4Q9H898 229 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 GNB4Q9HAV0 340 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 WFDC1Q9HC57 220 aa6.87□□□□□ -1.31
TDP1-208ENST00000553989 LYRM2Q9NU23 88 aaPredicted RBP6.87□□□□□ -1.31
TDP1-208ENST00000553989 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 TRAV1-1A0A0B4J248 108 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 TRAV41A0A0B4J266 112 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 C7orf77A4D0Y5 90 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 CXorf65A6NEN9 183 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 RBFOX3A6NFN3 312 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 G3V318 75 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 AGPAT2O15120 278 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 PGLYRP1O75594 196 aaPredicted RBP6.86□□□□□ -1.31
TDP1-208ENST00000553989 IFNA17P01571 189 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 HBZP02008 142 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 S100A8P05109 93 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 S100A9P06702 114 aaKnown RBP6.86□□□□□ -1.31
TDP1-208ENST00000553989 S100A6P06703 90 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 SERPINE2P07093 398 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 TAS2R30P59541 319 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 GNB1P62873 340 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 NHLH2Q02577 135 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 TMEM30BQ3MIR4 351 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 IGSF11Q5DX21 431 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 CT45A1Q5HYN5 189 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 TRAT1Q6PIZ9 186 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 SBSPONQ8IVN8 264 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 TMEM252Q8N6L7 170 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 SLC35G3Q8N808 338 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 ZNF491Q8N8L2 437 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 OR10G4Q8NGN3 311 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 OR10J5Q8NHC4 309 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 CT45A3Q8NHU0 189 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 ABHD5Q8WTS1 349 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 SECTM1Q8WVN6 248 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 TP53RKQ96S44 253 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 TCEAL7Q9BRU2 100 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 ABHD14AQ9BUJ0 271 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 SCRT1Q9BWW7 348 aa6.86□□□□□ -1.31
TDP1-208ENST00000553989 KLK15Q9H2R5 256 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms