RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 MGST2Q99735 147 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 TMEM208Q9BTX3 173 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 HIGD1AQ9Y241 93 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 NMUP48645 174 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 PRRX1P54821 245 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 COLCA1Q6ZS62 124 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 CDX2Q99626 313 aaPredicted RBP8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 CHD3Q12873 2000 aaKnown RBP8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 YLPM1P49750 1951 aaKnown RBP8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 HIGD1CA8MV81 97 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 GNG7O60262 68 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 PYYP10082 97 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 CA7P43166 264 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 HOXA4Q00056 320 aaPredicted RBP8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 SRSF12Q8WXF0 261 aaKnown RBP8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 SAA2-SAA4A0A096LPE2 208 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 J3QR89 54 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 PEX7O00628 323 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 SAA2P0DJI9 122 aaPredicted RBP8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 SELLP14151 372 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 TDGF1P3P51864 188 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 HBBP68871 147 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 LCN12Q6JVE5 192 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 MRPL32Q9BYC8 188 aaKnown RBP8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 PPP1R14DQ9NXH3 145 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 PPIAL4EA0A075B759 164 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 GAGE10A6NGK3 116 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 C15orf61A6NNL5 157 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 PPIAL4DF5H284 164 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 CRYABP02511 175 aaKnown RBP8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 PPIAL4FP0DN26 164 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 RAB37Q96AX2 223 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 PMCHL2Q9BQD1 86 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 GNB1LQ9BYB4 327 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 PPIAL4AQ9Y536 164 aa8.49□□□□□ -1.05
SMARCC2-209ENST00000550164 IZUMO1RA6ND01 250 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 A6NDN8 102 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 KLK10O43240 276 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 ORM1P02763 201 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 GNG5P63218 68 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 TIMD4Q96H15 378 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 OSTCQ9NRP0 149 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 PLCE1Q9P212 2302 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 HLA-DRB1P01911 266 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 MYOD1P15172 320 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 GFRALQ6UXV0 394 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 TCF24Q7RTU0 167 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 TMEM105Q8N8V8 129 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 COQ2Q96H96 371 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 IGHV2OR16-5A0A0B4J2B6 119 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 YPEL1O60688 119 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 NBEAP1P0C6P0 100 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 ZNF114Q8NC26 417 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 OR4C13Q8NGP0 309 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 GRAMD2BQ96HH9 432 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 YPEL2Q96QA6 119 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 TRAV5A0A0B4J249 113 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 KBTBD11-OT1A0A1B0GTJ5 212 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 SPAARA0A1B0GVQ0 90 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 ZNF503-AS2A6NEH8 195 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 CDKN1AP38936 164 aa8.48□□□□□ -1.05
SMARCC2-209ENST00000550164 C9orf172C9J069 976 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 NPIPB11E5RHQ5 1161 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 C1orf174Q8IYL3 243 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 CLEC5AQ9NY25 188 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 TRGV8A0A0C4DH27 118 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 NTN3O00634 580 aaPredicted RBP8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 COMPP49747 757 aaPredicted RBP8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 UNQ5815/PRO19632Q6UWF5 114 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 GFRA3O60609 400 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 SAA1P0DJI8 122 aaPredicted RBP8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 FDCSPQ8NFU4 85 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 OR10W1Q8NGF6 305 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 GP6Q9HCN6 339 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
SMARCC2-209ENST00000550164 TTC28Q96AY4 2481 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 AHRRA9YTQ3 701 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 M0R296 226 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 C3orf79P0CE67 100 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 LHFPL4Q7Z7J7 247 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 RAB1CQ92928 201 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 LPAR2Q9HBW0 351 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 MBNL3Q9NUK0 354 aaKnown RBP8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 CDC42EP3Q9UKI2 254 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 UFC1Q9Y3C8 167 aa8.46□□□□□ -1.05
SMARCC2-209ENST00000550164 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 SNRNP40Q96DI7 357 aaKnown RBP8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 ALKBH7Q9BT30 221 aaPredicted RBP8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 MRPL20Q9BYC9 149 aaKnown RBP8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 SPRR3Q9UBC9 169 aa8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 LIPFP07098 398 aa8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 GPX1P07203 203 aa8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 S100A4P26447 101 aaKnown RBP8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 C9orf106Q8NAJ2 232 aa8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 SCNM1Q9BWG6 230 aa8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 ZFP30Q9Y2G7 519 aa8.46□□□□□ -1.06
SMARCC2-209ENST00000550164 C2orf16Q68DN1 1984 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms