RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 UBE2E1P51965 193 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 BRWD1-AS2P59051 145 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 LINC00205P59089 165 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 OR2B8PP59922 312 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 RPL15P61313 204 aaKnown RBP5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 RPL8P62917 257 aaKnown RBP5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 BLOC1S1P78537 153 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 NHLH2Q02577 135 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 CD69Q07108 199 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 CLINT1Q14677 625 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 PLGLAQ15195 96 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 IZUMO4Q1ZYL8 232 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 NSUN5P1Q3KNT7 163 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 DEFB121Q5J5C9 76 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 RPL7L1Q6DKI1 246 aaKnown RBP5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 PUSL1Q8N0Z8 303 aaKnown RBP5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 STPG2Q8N412 459 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 TMEM217Q8N7C4 229 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 Q8N7P7 452 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 ZNF709Q8N972 641 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 OR4P4Q8NGL7 312 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 OR5C1Q8NGR4 320 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 OR2T10Q8NGZ9 312 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 TMEM167AQ8TBQ9 72 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 MALSU1Q96EH3 234 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 SAT2Q96F10 170 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 FANCD2OSQ96PS1 177 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 GINS3Q9BRX5 216 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 TMEM147Q9BVK8 224 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 GGACTQ9BVM4 153 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 SIRPDQ9H106 197 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 CYTL1Q9NRR1 136 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 TMEM14BQ9NUH8 114 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 ARHGAP32A7KAX9 2087 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 A0A0U1RQK1 487 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 LINC00862A6NCI5 91 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 BTBD17A6NE02 478 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 NUDT19A8MXV4 375 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 ODF3BA8MYP8 253 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 UMAD1C9J7I0 102 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 C17orf112F2Z3M2 114 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 H3BP45 60 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 K7EIL1 84 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 CYB5BO43169 146 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 MOSP00540 346 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 CFDP00746 253 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 PRH1P02810 166 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 IFNA4P05014 189 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 METTL15P1P0C7V9 234 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 FAM106CPP0CH98 169 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 PAX9P55771 341 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 PRCDQ00LT1 54 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 SLC38A11Q08AI6 406 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 TMEM267Q0VDI3 215 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 RAB31Q13636 194 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 AKR1C8PQ5T2L2 129 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 OR8G2PQ6IF36 304 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 TMEM14EPQ6UXP3 125 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 ETV3LQ6ZN32 361 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 HSD17B13Q7Z5P4 300 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 VKORC1L1Q8N0U8 176 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 SLC24A4Q8NFF2 622 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 HINT2Q9BX68 163 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 PARD6GQ9BYG4 376 aaPredicted RBP5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 PRDM13Q9H4Q3 707 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 KCNIP2Q9NS61 270 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 UQCC1Q9NVA1 299 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 ZNRD1Q9P1U0 126 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 SIGLEC9Q9Y336 463 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 FBXO7Q9Y3I1 522 aa5.65□□□□□ -1.5
DEPDC4-208ENST00000549341 ZNF705EA8MWA4 302 aaPredicted RBP5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 LY6LH3BQJ8 138 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 SLC25A17O43808 307 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 ATP6V1G1O75348 118 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 MPDU1O75352 247 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 FBXO24O75426 580 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 MBP02144 154 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 IGKV1-16P04430 117 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 SNRNP70P08621 437 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 IL6RP08887 468 aaPredicted RBP5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 NPY1RP25929 384 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 RPL27AP46776 148 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 SULT1A2P50226 295 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 BPIFB3P59826 476 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 PAX2Q02962 417 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 KLRD1Q13241 179 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 HES1Q14469 280 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 UTF1Q5T230 341 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 DPPA3Q6W0C5 159 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 THNSL2Q86YJ6 484 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 KLHDC1Q8N7A1 406 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 TMED6Q8WW62 240 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 SRSF8Q9BRL6 282 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 ARV1Q9H2C2 271 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 MED9Q9NWA0 146 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 GAR1Q9NY12 217 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 METTL1Q9UBP6 276 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 HILPDAQ9Y5L2 63 aa5.64□□□□□ -1.51
DEPDC4-208ENST00000549341 IGHV3-72A0A0B4J1Y9 119 aa5.63□□□□□ -1.51
DEPDC4-208ENST00000549341 TEX50A0A1B0GTY4 177 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms