RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 UHRF2Q96PU4 802 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 C19orf24Q9BVV8 132 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 CHODLQ9H9P2 273 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.57□□□□□ -0.4
BRF1-212ENST00000547562 B9A039 149 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 CD3EP07766 207 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 IGHV1-8P0DP01 117 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 IL3RAP26951 378 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 GPX4P36969 197 aaPredicted RBP12.57□□□□□ -0.4
BRF1-212ENST00000547562 FOXL1Q12952 345 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 PSG5Q15238 335 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 TGIF2LXQ8IUE1 241 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 TMEM167BQ9NRX6 74 aa12.57□□□□□ -0.4
BRF1-212ENST00000547562 TECRQ9NZ01 308 aaKnown RBP12.57□□□□□ -0.4
BRF1-212ENST00000547562 CGB1A6NKQ9 187 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 OR5G3P0C626 314 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 HLA-DRB5Q30154 266 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 PLXNB1O43157 2135 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 WT1-ASQ06250 92 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 PQLC2Q6ZP29 291 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 C11orf42Q8N5U0 333 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 HIST1H2BLQ99880 126 aa12.56□□□□□ -0.4
BRF1-212ENST00000547562 ZNF430Q9H8G1 570 aaPredicted RBP12.56□□□□□ -0.4
BRF1-212ENST00000547562 C9JCJ5 164 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 MC5RP33032 325 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 COA6Q5JTJ3 125 aaKnown RBP12.55□□□□□ -0.4
BRF1-212ENST00000547562 C10orf55Q5SWW7 151 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 TEX38Q6PEX7 206 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 OR1P1Q8NH06 330 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 OR2T6Q8NHC8 308 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 SGMS2Q8NHU3 365 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 ZNF503Q96F45 646 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 ACY3Q96HD9 319 aa12.55□□□□□ -0.4
BRF1-212ENST00000547562 TRBV23-1A0A0A0MS06 115 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 XKRY2A2RUG3 117 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 PLAUP00749 431 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 HNF1AP20823 631 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 TAS2R45P59539 299 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 PACRGQ96M98 296 aaPredicted RBP12.54□□□□□ -0.4
BRF1-212ENST00000547562 TMEM133Q9H2Q1 129 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 VMA21Q3ZAQ7 101 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 CDPF1Q6NVV7 123 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 RNASEH2CQ8TDP1 164 aaKnown RBP12.54□□□□□ -0.4
BRF1-212ENST00000547562 TMEM37Q8WXS4 190 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 LY96Q9Y6Y9 160 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 SPTA1P02549 2419 aa12.54□□□□□ -0.4
BRF1-212ENST00000547562 A0A0U1RQK1 487 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 ZNF320A2RRD8 509 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 K7EN84 100 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 SLC25A17O43808 307 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 OR7C2O60412 319 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 DMRT1Q9Y5R6 373 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 PSMB11A5LHX3 300 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 PDLIM4P50479 330 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 SUB1P53999 127 aaKnown RBP eCLIP12.53□□□□□ -0.4
BRF1-212ENST00000547562 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
BRF1-212ENST00000547562 LINC01560Q8TB33 94 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 RITA1Q96K30 269 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 SLC25A33Q9BSK2 321 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 FNDC4Q9H6D8 234 aaPredicted RBP12.53□□□□□ -0.4
BRF1-212ENST00000547562 MALRD1Q5VYJ5 2156 aa12.53□□□□□ -0.4
BRF1-212ENST00000547562 ANKHD1Q8IWZ3 2542 aaKnown RBP12.53□□□□□ -0.4
BRF1-212ENST00000547562 PPOXP50336 477 aa12.52□□□□□ -0.4
BRF1-212ENST00000547562 EAF1Q96JC9 268 aaPredicted RBP12.52□□□□□ -0.4
BRF1-212ENST00000547562 MRPL32Q9BYC8 188 aaKnown RBP12.52□□□□□ -0.4
BRF1-212ENST00000547562 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.4
BRF1-212ENST00000547562 RALYQ9UKM9 306 aaKnown RBP12.52□□□□□ -0.4
BRF1-212ENST00000547562 C8orf88P0DMB2 117 aa12.52□□□□□ -0.41
BRF1-212ENST00000547562 LGALS7P47929 136 aa12.52□□□□□ -0.41
BRF1-212ENST00000547562 CASP6P55212 293 aa12.52□□□□□ -0.41
BRF1-212ENST00000547562 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.41
BRF1-212ENST00000547562 TPRP12270 2363 aaKnown RBP12.52□□□□□ -0.41
BRF1-212ENST00000547562 OR10J4P0C629 311 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 CRYBB3P26998 211 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 SSBP2P81877 361 aaPredicted RBP12.51□□□□□ -0.41
BRF1-212ENST00000547562 TNFRSF14Q92956 283 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 IGHV2-26A0A0B4J1V2 119 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 IGHV3-72A0A0B4J1Y9 119 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 A0A1W2PPI3 338 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 FAM90A27PA6NNH2 459 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 LYNX1G3V0Z9 82 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 ENSAO43768 121 aaKnown RBP12.51□□□□□ -0.41
BRF1-212ENST00000547562 AMBPP02760 352 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 LYNX1P0DP58 116 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 PRSS8Q16651 343 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 FBXL19-AS1Q494R0 122 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 DNLZQ5SXM8 178 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 MUC15Q8N387 334 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 PFDN5Q99471 154 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 RNF2Q99496 336 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 DNAJC4Q9NNZ3 241 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 TRAPPC1Q9Y5R8 145 aa12.51□□□□□ -0.41
BRF1-212ENST00000547562 HELTA6NFD8 242 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 GGTLC3B5MD39 225 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 HIST1H1BP16401 226 aaKnown RBP12.5□□□□□ -0.41
BRF1-212ENST00000547562 CA7P43166 264 aa12.5□□□□□ -0.41
BRF1-212ENST00000547562 ZNF841Q6ZN19 808 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms