RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PHLDA3Q9Y5J5 127 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 TRGV2A0A075B6R0 118 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 CDKN1BP46527 198 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 MEF2CQ06413 473 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-218ENST00000545889 TMEM140Q9NV12 185 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 LRP4O75096 1905 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 MPZP25189 248 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 SSTR5P35346 364 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 DYNLT3P51808 116 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 FGF8P55075 233 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-218ENST00000545889 TMEM241Q24JQ0 296 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 CLEC18BQ6UXF7 455 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 PRNTQ86SH4 94 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 BIVMQ86UB2 503 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 TRAPPC1Q9Y5R8 145 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 FOXG1P55316 489 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-218ENST00000545889 DLX1P56177 255 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 UNC119Q13432 240 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 RNASEKQ6P5S7 137 aaKnown RBP7.23□□□□□ -1.25
CLIP1-218ENST00000545889 FAM159AQ6UWV7 190 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 LYZL2Q7Z4W2 148 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 SPRY4Q9C004 299 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 MEGF9Q9H1U4 602 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 CDC42EP3Q9UKI2 254 aa7.23□□□□□ -1.25
CLIP1-218ENST00000545889 COL4A2P08572 1712 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 K7EM74 188 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 SAP30O75446 220 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 MOSP00540 346 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 IL4P05112 153 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 TCL1AP56279 114 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 HERVK_113P61574 105 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 RPL24P83731 157 aaKnown RBP7.22□□□□□ -1.25
CLIP1-218ENST00000545889 C3orf36Q3SXR2 165 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 SAMD13Q5VXD3 122 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 GGNQ86UU5 652 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 VPS13AQ96RL7 3174 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 TM4SF5O14894 197 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 WNT2P09544 360 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 GPR183P32249 361 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 FOXF2Q12947 444 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 MST1LQ2TV78 715 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 FASNP49327 2511 aaKnown RBP7.22□□□□□ -1.25
CLIP1-218ENST00000545889 FBLN7Q53RD9 439 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 FAM74A4Q5TZK3 123 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 Q6ZVH6 145 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 HOGA1Q86XE5 327 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 STHQ8IWL8 128 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 SAXO1Q8IYX7 474 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 ZNF645Q8N7E2 425 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 FAM216AQ8WUB2 273 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 HSPB9Q9BQS6 159 aa7.22□□□□□ -1.25
CLIP1-218ENST00000545889 CHTOPQ9Y3Y2 248 aaKnown RBP7.22□□□□□ -1.25
CLIP1-218ENST00000545889 IGHV3-48P01763 117 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 CELA3BP08861 270 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 PMCHP20382 165 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 PRR30Q53SZ7 412 aaPredicted RBP7.21□□□□□ -1.25
CLIP1-218ENST00000545889 PTX4Q96A99 478 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 LPAR5Q9H1C0 372 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 PRB3Q04118 309 aaPredicted RBP7.21□□□□□ -1.25
CLIP1-218ENST00000545889 TPTE2P1Q5T6R2 138 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 KLHDC1Q8N7A1 406 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 OR5P3Q8WZ94 311 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 ARPC1AQ92747 370 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 CLUHP3Q96NS8 147 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 RSG1Q9BU20 258 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 S4R3C0 116 aa7.21□□□□□ -1.25
CLIP1-218ENST00000545889 A0A087WV48 116 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 C9JCJ5 164 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 C11orf94C9JXX5 98 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 CEACAM4O75871 244 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 CCL3L1P16619 93 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 RBX1P62877 108 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 C1orf194Q5T5A4 169 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 SCGB1D4Q6XE38 83 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 ACP7Q6ZNF0 438 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 C19orf35Q6ZS72 473 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 AQP3Q92482 292 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 AP5S1Q9NUS5 200 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 C21orf62Q9NYP8 219 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 VAX2Q9UIW0 290 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 A0A1B0GV72 72 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 NPIPB13A6NJU9 1138 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 NPIPB4C9JG80 1138 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 FCN1O00602 326 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 HKR1P10072 659 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 NPBWR2P48146 333 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 DLX6P56179 175 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 TMEM50BP56557 158 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 CFAP161Q6P656 301 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 TMEM54Q969K7 222 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 LINC01587Q99440 93 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 CRIM1Q9NZV1 1036 aa7.21□□□□□ -1.26
CLIP1-218ENST00000545889 TEX50A0A1B0GTY4 177 aa7.2□□□□□ -1.26
CLIP1-218ENST00000545889 CD24P25063 80 aa7.2□□□□□ -1.26
CLIP1-218ENST00000545889 UQCRFS1P47985 274 aa7.2□□□□□ -1.26
CLIP1-218ENST00000545889 B3GALT5-AS1P59052 145 aa7.2□□□□□ -1.26
CLIP1-218ENST00000545889 RND3P61587 244 aa7.2□□□□□ -1.26
CLIP1-218ENST00000545889 SLC35E4Q6ICL7 350 aa7.2□□□□□ -1.26
CLIP1-218ENST00000545889 FAM53AQ6NSI3 398 aaPredicted RBP7.2□□□□□ -1.26
CLIP1-218ENST00000545889 CLEC19AQ6UXS0 136 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms