RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 REG1AP05451 166 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 HLA-GP17693 338 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 RND3P61587 244 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
USP28-212ENST00000544750 LPCAT3Q6P1A2 487 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 TBC1D26Q86UD7 250 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 KRTAP4-5Q9BYR2 181 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 TMEM140Q9NV12 185 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 RABL2AQ9UBK7 228 aaPredicted RBP9.39□□□□□ -0.91
USP28-212ENST00000544750 FBXL17Q9UF56 701 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 RABL2BQ9UNT1 228 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 V9GYH0 126 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 AGRNO00468 2067 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 TGOLN2O43493 480 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 FGF2P09038 288 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 RPA2P15927 270 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 PI3P19957 117 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 PTBP1P26599 531 aaKnown RBP eCLIP9.38□□□□□ -0.91
USP28-212ENST00000544750 LPAR6P43657 344 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 PPP5CP53041 499 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 OR2B8PP59922 312 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 ZNF124Q15973 351 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 LAMTOR1Q6IAA8 161 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 PLET1Q6UQ28 207 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 OR5B3Q8NH48 314 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 AIFM2Q9BRQ8 373 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 CSTL1Q9H114 145 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 HRASLSQ9HDD0 168 aa9.38□□□□□ -0.91
USP28-212ENST00000544750 DAZ1Q9NQZ3 744 aaKnown RBP9.38□□□□□ -0.91
USP28-212ENST00000544750 FAM212BQ9NTI7 297 aaPredicted RBP9.38□□□□□ -0.91
USP28-212ENST00000544750 IGLC7A0M8Q6 106 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 ANKRD20A5PA0PJZ0 165 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 OR4C46A6NHA9 309 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 MPTX1A8MV57 137 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 DEFA4P12838 97 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 G6PCP35575 357 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 MFAP2P55001 183 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 ZNF79Q15937 498 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 CCDC190Q86UF4 302 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 CADM3Q8N126 398 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 DMBX1Q8NFW5 382 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 OR13C8Q8NGS7 320 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 OR11H2Q8NH07 326 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 TERB2Q8NHR7 220 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 TRIM63Q969Q1 353 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 ZNF486Q96H40 463 aaPredicted RBP9.37□□□□□ -0.91
USP28-212ENST00000544750 ZNF414Q96IQ9 312 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 SEC22AQ96IW7 307 aa9.37□□□□□ -0.91
USP28-212ENST00000544750 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 DBX1A6NMT0 343 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 KRASP01116 189 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 CTSDP07339 412 aaPredicted RBP9.36□□□□□ -0.91
USP28-212ENST00000544750 AKAIN1P0CW23 69 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 PGAM2P15259 253 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 ADMP35318 185 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 PIGPP57054 158 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 MEF2DQ14814 521 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 MARCH1Q8TCQ1 289 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 TP53RKQ96S44 253 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 NSG2Q9Y328 171 aa9.36□□□□□ -0.91
USP28-212ENST00000544750 IGLL5B9A064 214 aa9.35□□□□□ -0.91
USP28-212ENST00000544750 F8W735 103 aaPredicted RBP9.35□□□□□ -0.91
USP28-212ENST00000544750 K7EMT4 169 aa9.35□□□□□ -0.91
USP28-212ENST00000544750 NDUFA4O00483 81 aa9.35□□□□□ -0.91
USP28-212ENST00000544750 ERVK-16P61578 105 aa9.35□□□□□ -0.91
USP28-212ENST00000544750 VN1R17PQ8TDU5 208 aa9.35□□□□□ -0.91
USP28-212ENST00000544750 RTBDNQ9BSG5 229 aaPredicted RBP9.35□□□□□ -0.91
USP28-212ENST00000544750 CHRDL1Q9BU40 450 aa9.35□□□□□ -0.91
USP28-212ENST00000544750 TEX50A0A1B0GTY4 177 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 C11orf94C9JXX5 98 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 RTL8CO15255 209 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 DEFB4AO15263 64 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 P0C879 139 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 S100GP29377 79 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 KLF9Q13886 244 aaPredicted RBP9.34□□□□□ -0.91
USP28-212ENST00000544750 OR10W1Q8NGF6 305 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 OR51S1Q8NGJ8 323 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 BSCL2Q96G97 398 aaPredicted RBP9.34□□□□□ -0.91
USP28-212ENST00000544750 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 SRSF8Q9BRL6 282 aaKnown RBP9.34□□□□□ -0.91
USP28-212ENST00000544750 COMMD5Q9GZQ3 224 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 HRH4Q9H3N8 390 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 NDUFA4L2Q9NRX3 87 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 TMEM14BQ9NUH8 114 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 THYN1Q9P016 225 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 GPR132Q9UNW8 380 aa9.34□□□□□ -0.91
USP28-212ENST00000544750 C15orf61A6NNL5 157 aa9.33□□□□□ -0.92
USP28-212ENST00000544750 DISC1C4P0D8 188 aa9.33□□□□□ -0.92
USP28-212ENST00000544750 IGKV1-5P01602 117 aa9.33□□□□□ -0.92
USP28-212ENST00000544750 ETV6P41212 452 aa9.33□□□□□ -0.92
USP28-212ENST00000544750 WT1-ASQ06250 92 aa9.33□□□□□ -0.92
USP28-212ENST00000544750 SURF2Q15527 256 aaPredicted RBP9.33□□□□□ -0.92
USP28-212ENST00000544750 IZUMO4Q1ZYL8 232 aa9.33□□□□□ -0.92
USP28-212ENST00000544750 SPSB3Q6PJ21 355 aa9.33□□□□□ -0.92
USP28-212ENST00000544750 Q8NAQ8 132 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms