RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 VWC2LB2RUY7 222 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 PCP4P48539 62 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 TMEM144Q7Z5S9 345 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 TRAV41A0A0B4J266 112 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 F2Z2F3 143 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 PAX4O43316 350 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 CD5P06127 495 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 PSG7Q13046 419 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 C9orf106Q8NAJ2 232 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 C15orf61A6NNL5 157 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 YPEL1O60688 119 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 UMODP07911 640 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 FAM19A2Q8N3H0 131 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 YPEL2Q96QA6 119 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 EPDR1Q9UM22 224 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 PSG8Q9UQ74 426 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 A0A0G2JK05 382 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 A0A1W2PR77 199 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 TMEM238C9JI98 176 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 SRD5A1P18405 259 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 UCP1P25874 307 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 MESP2Q0VG99 397 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 SFTA2Q6UW10 78 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 WFDC12Q8WWY7 111 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 ABCA3Q99758 1704 aa8.98□□□□□ -0.97
GABRB3-204ENST00000541819 INS-IGF2F8WCM5 200 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 INSP01308 110 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 EVI2AP22794 236 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 RASL10AQ92737 203 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 CTHRC1Q96CG8 243 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 PRDM13Q9H4Q3 707 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 MPTX1A8MV57 137 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 HIST1H4AP62805 103 aaKnown RBP8.97□□□□□ -0.97
GABRB3-204ENST00000541819 RPL36AP83881 106 aaKnown RBP8.97□□□□□ -0.97
GABRB3-204ENST00000541819 CD200R1LQ6Q8B3 271 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 RPL36ALQ969Q0 106 aaKnown RBP8.97□□□□□ -0.97
GABRB3-204ENST00000541819 PRDM6Q9NQX0 595 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 A8MWV9 139 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 C4orf51C9J302 202 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 CTSBP07858 339 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 FAM166AQ6J272 317 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 MRPS18CQ9Y3D5 142 aaKnown RBP8.97□□□□□ -0.97
GABRB3-204ENST00000541819 EPOPA6NHQ4 379 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 C1QCP02747 245 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 ERG28Q9UKR5 140 aa8.97□□□□□ -0.97
GABRB3-204ENST00000541819 GAGE2EQ4V326 116 aa8.96□□□□□ -0.97
GABRB3-204ENST00000541819 LINC01590Q5TEZ4 76 aa8.96□□□□□ -0.97
GABRB3-204ENST00000541819 HAPLN4Q86UW8 402 aa8.96□□□□□ -0.97
GABRB3-204ENST00000541819 OVOL2Q9BRP0 275 aa8.96□□□□□ -0.97
GABRB3-204ENST00000541819 GAGE2DQ9UEU5 116 aa8.96□□□□□ -0.97
GABRB3-204ENST00000541819 SRSF4Q08170 494 aaKnown RBP8.96□□□□□ -0.97
GABRB3-204ENST00000541819 CDK5RAP2Q96SN8 1893 aa8.96□□□□□ -0.97
GABRB3-204ENST00000541819 PRB3Q04118 309 aaPredicted RBP8.96□□□□□ -0.98
GABRB3-204ENST00000541819 SRSF7Q16629 238 aaKnown RBP eCLIP8.96□□□□□ -0.98
GABRB3-204ENST00000541819 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.96□□□□□ -0.98
GABRB3-204ENST00000541819 TMEM8BA6NDV4 472 aa8.96□□□□□ -0.98
GABRB3-204ENST00000541819 WISP3O95389 354 aaPredicted RBP8.96□□□□□ -0.98
GABRB3-204ENST00000541819 CELA3BP08861 270 aa8.96□□□□□ -0.98
GABRB3-204ENST00000541819 SRP19P09132 144 aaKnown RBP8.96□□□□□ -0.98
GABRB3-204ENST00000541819 RPL35AP18077 110 aaKnown RBP8.96□□□□□ -0.98
GABRB3-204ENST00000541819 TRGV1A0A0A0MS02 117 aa8.96□□□□□ -0.98
GABRB3-204ENST00000541819 CCL20P78556 96 aa8.96□□□□□ -0.98
GABRB3-204ENST00000541819 RNASE7Q9H1E1 156 aaKnown RBP8.96□□□□□ -0.98
GABRB3-204ENST00000541819 CD24P25063 80 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 HOXD3P31249 432 aaPredicted RBP8.95□□□□□ -0.98
GABRB3-204ENST00000541819 ATP5L2Q7Z4Y8 100 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 ZNF525Q8N782 197 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 ORAOV1Q8WV07 137 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 GLI3P10071 1580 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.95□□□□□ -0.98
GABRB3-204ENST00000541819 TIMM23O14925 209 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 PPIFP30405 207 aaKnown RBP8.95□□□□□ -0.98
GABRB3-204ENST00000541819 NPC2P61916 151 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 NHLRC3Q5JS37 347 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 ANAPC10Q9UM13 185 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 QSER1Q2KHR3 1735 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 A0A087WWC5 75 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 PQLC2LA1A4F0 135 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 E9PLN8 166 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 CCL1P22362 96 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 LAGE3Q14657 143 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 C1QL2Q7Z5L3 287 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 TNFRSF14Q92956 283 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 A0A0G2JMM0 328 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 A0A1W2PPB8 328 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 A0A1W2PRS3 328 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 KIR3DP1A8MWS1 328 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 PRCDQ00LT1 54 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 DMRTA1Q5VZB9 504 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 PLEKHB2Q96CS7 222 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 NUP205Q92621 2012 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 PLPPR1Q8TBJ4 325 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 TAF1P21675 1872 aa8.95□□□□□ -0.98
GABRB3-204ENST00000541819 RAMP1O60894 148 aa8.94□□□□□ -0.98
GABRB3-204ENST00000541819 ADMP35318 185 aa8.94□□□□□ -0.98
GABRB3-204ENST00000541819 CD300EQ496F6 205 aaPredicted RBP8.94□□□□□ -0.98
GABRB3-204ENST00000541819 TEX43Q6ZNM6 134 aa8.94□□□□□ -0.98
GABRB3-204ENST00000541819 RNF166Q96A37 237 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms