RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SLC35E1Q96K37 410 aa7.5□□□□□ -1.21
DDB1-211ENST00000538280 PCGF1Q9BSM1 259 aa7.5□□□□□ -1.21
DDB1-211ENST00000538280 PATZ1Q9HBE1 687 aaKnown RBP7.5□□□□□ -1.21
DDB1-211ENST00000538280 VPS13CQ709C8 3753 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 H7BYZ3 331 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 CCL21O00585 134 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 IGLV2-23P01705 113 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 S100A9P06702 114 aaKnown RBP7.49□□□□□ -1.21
DDB1-211ENST00000538280 TRGC1P0CF51 173 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 COX6B1P14854 86 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 AREGP15514 252 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 USF1P22415 310 aaPredicted RBP7.49□□□□□ -1.21
DDB1-211ENST00000538280 GCHFRP30047 84 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 CA7P43166 264 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 GALR1P47211 349 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 NDUFA6P56556 154 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 CD69Q07108 199 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 RAB31Q13636 194 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 LRRC10Q5BKY1 277 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 SLC16A13Q7RTY0 426 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 ZCCHC24Q8N2G6 241 aaKnown RBP7.49□□□□□ -1.21
DDB1-211ENST00000538280 NANPQ8TBE9 248 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 IMMP2LQ96T52 175 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 TMEM204Q9BSN7 226 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 NDUFA4L2Q9NRX3 87 aa7.49□□□□□ -1.21
DDB1-211ENST00000538280 TRBV23-1A0A0A0MS06 115 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 CGB1A6NKQ9 187 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 B9A039 149 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 DVL1O14640 695 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 PPP1R2P9O14990 202 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 APOBEC3AP31941 199 aaPredicted RBP7.48□□□□□ -1.21
DDB1-211ENST00000538280 GPX4P36969 197 aaPredicted RBP7.48□□□□□ -1.21
DDB1-211ENST00000538280 CTAG1AP78358 180 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 SSX2Q16385 188 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 COA6Q5JTJ3 125 aaKnown RBP7.48□□□□□ -1.21
DDB1-211ENST00000538280 DNLZQ5SXM8 178 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 SPATA31B1PQ5VZV4 182 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 PVRIGQ6DKI7 326 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 HIST3H2BBQ8N257 126 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 C11orf42Q8N5U0 333 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 OR9G1Q8NH87 305 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 VSTM2AQ8TAG5 236 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 SSMEM1Q8WWF3 244 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 CACNG8Q8WXS5 425 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 HARBI1Q96MB7 349 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 OR5B12Q96R08 314 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 YTHDF2Q9Y5A9 579 aaKnown RBP7.48□□□□□ -1.21
DDB1-211ENST00000538280 LY96Q9Y6Y9 160 aa7.48□□□□□ -1.21
DDB1-211ENST00000538280 IGKV1OR2-108A0A075B7D4 117 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 A0A1W2PN81 502 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 PSMB11A5LHX3 300 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 C9JCJ5 164 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 MT-CO2P00403 227 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 CD3EP07766 207 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 OR5G3P0C626 314 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 S100PP25815 95 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 CHRNA7P36544 502 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 FAM3BP58499 235 aaPredicted RBP7.47□□□□□ -1.21
DDB1-211ENST00000538280 UBE2G2P60604 165 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 LCN2P80188 198 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 GAMTQ14353 236 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 MRGPRG-AS1Q2M3A8 158 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 OR4C13Q8NGP0 309 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 OR4X1Q8NH49 305 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 CCL17Q92583 94 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 TNFRSF14Q92956 283 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 FLYWCH2Q96CP2 140 aaKnown RBP7.47□□□□□ -1.21
DDB1-211ENST00000538280 C19orf24Q9BVV8 132 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 ELOVL1Q9BW60 279 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 OR51M1Q9H341 326 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 SEPSECSQ9HD40 501 aaKnown RBP7.47□□□□□ -1.21
DDB1-211ENST00000538280 DYNLRB1Q9NP97 96 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 FUT9Q9Y231 359 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 WASHC3Q9Y3C0 194 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 DOCK11Q5JSL3 2073 aa7.47□□□□□ -1.21
DDB1-211ENST00000538280 TRBV20OR9-2A0A075B6H5 130 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 IGHV1-69-2A0A0G2JMI3 117 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.46□□□□□ -1.22
DDB1-211ENST00000538280 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 NDUFB4O95168 129 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 RBP4P02753 201 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 CRYGBP07316 175 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 SOD3P08294 240 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 IGHV1-8P0DP01 117 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 HOXB4P17483 251 aaPredicted RBP7.46□□□□□ -1.22
DDB1-211ENST00000538280 IL3RAP26951 378 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 CHRNB4P30926 498 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 MC5RP33032 325 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 RPL8P62917 257 aaKnown RBP7.46□□□□□ -1.22
DDB1-211ENST00000538280 PAX2Q02962 417 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 DIAPH2-AS1Q14236 149 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 ACTL10Q5JWF8 245 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 CST9LP1Q5W188 147 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 ZNF841Q6ZN19 808 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 ZNF114Q8NC26 417 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 OR2T10Q8NGZ9 312 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms