RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 FNDC4Q9H6D8 234 aaPredicted RBP10.03□□□□□ -0.8
CHFR-216ENST00000538235 ZC4H2Q9NQZ6 224 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.03□□□□□ -0.8
CHFR-216ENST00000538235 FKBP11Q9NYL4 201 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.02□□□□□ -0.81
CHFR-216ENST00000538235 C13orf42A0A1B0GVH6 325 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 IFNA17P01571 189 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 ANXA3P12429 323 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 HOXD3P31249 432 aaPredicted RBP10.02□□□□□ -0.81
CHFR-216ENST00000538235 HOXA1P49639 335 aaPredicted RBP10.02□□□□□ -0.81
CHFR-216ENST00000538235 SPCS3P61009 180 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 MLANAQ16655 118 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 MZT2BQ6NZ67 158 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 OR4D5Q8NGN0 318 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 OR52E5Q8NH55 327 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 ENKURQ8TC29 256 aa10.02□□□□□ -0.81
CHFR-216ENST00000538235 ZNF431Q8TF32 576 aaPredicted RBP10.02□□□□□ -0.81
CHFR-216ENST00000538235 A0A1B0GU03 582 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 LINC01619G3V211 115 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 ATG12O94817 140 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 TMEM50AO95807 157 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 HSPB1P04792 205 aaKnown RBP10.01□□□□□ -0.81
CHFR-216ENST00000538235 ADMP35318 185 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 ATP5G2Q06055 141 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 BEAN1Q3B7T3 259 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 SLC25A24Q6NUK1 477 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 IL34Q6ZMJ4 242 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 ADAMTSL5Q6ZMM2 481 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 HAPLN4Q86UW8 402 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 OR1P1Q8NH06 330 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 SCARB1Q8WTV0 552 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 USMG5Q96IX5 58 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 MARVELD1Q9BSK0 173 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 MAGT1Q9H0U3 335 aa10.01□□□□□ -0.81
CHFR-216ENST00000538235 MT-CO2P00403 227 aa10□□□□□ -0.81
CHFR-216ENST00000538235 IL5P05113 134 aa10□□□□□ -0.81
CHFR-216ENST00000538235 IAPPP10997 89 aa10□□□□□ -0.81
CHFR-216ENST00000538235 DEFA4P12838 97 aa10□□□□□ -0.81
CHFR-216ENST00000538235 GPR183P32249 361 aa10□□□□□ -0.81
CHFR-216ENST00000538235 KRTAP10-11P60412 298 aa10□□□□□ -0.81
CHFR-216ENST00000538235 ZNF767PQ75MW2 155 aa10□□□□□ -0.81
CHFR-216ENST00000538235 HSD17B13Q7Z5P4 300 aaPredicted RBP10□□□□□ -0.81
CHFR-216ENST00000538235 OR1S1Q8NH92 325 aa10□□□□□ -0.81
CHFR-216ENST00000538235 OR4C12Q96R67 309 aa10□□□□□ -0.81
CHFR-216ENST00000538235 CHRDL1Q9BU40 450 aa10□□□□□ -0.81
CHFR-216ENST00000538235 PEF1Q9UBV8 284 aaKnown RBP10□□□□□ -0.81
CHFR-216ENST00000538235 TMED3Q9Y3Q3 217 aa10□□□□□ -0.81
CHFR-216ENST00000538235 IGHV3-35A0A0C4DH35 117 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 A0A0G2JLM5 398 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 C15orf62A8K5M9 175 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 INMT-MINDY4F8WBC2 141 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
CHFR-216ENST00000538235 SLC25A6P12236 298 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 HIST1H1BP16401 226 aaKnown RBP9.99□□□□□ -0.81
CHFR-216ENST00000538235 CD33P20138 364 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 KLF5Q13887 457 aaPredicted RBP9.99□□□□□ -0.81
CHFR-216ENST00000538235 KPRPQ5T749 579 aaPredicted RBP9.99□□□□□ -0.81
CHFR-216ENST00000538235 UNQ9165/PRO28630Q6UXU0 137 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 COQ8AQ8NI60 647 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 MISP3Q96FF7 219 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 C11orf1Q9H5F2 150 aa9.99□□□□□ -0.81
CHFR-216ENST00000538235 RCL1Q9Y2P8 373 aaKnown RBP9.99□□□□□ -0.81
CHFR-216ENST00000538235 CEBPZOSA8MTT3 80 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 PRSS46E5RG02 174 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 OR2C1O95371 312 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 OR8U8P0C7N1 319 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 PAX9P55771 341 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 SYNJ2BPP57105 145 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 POLR2GP62487 172 aaKnown RBP eCLIP9.98□□□□□ -0.81
CHFR-216ENST00000538235 IL15RAQ13261 267 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 C12orf45Q8N5I9 185 aaPredicted RBP9.98□□□□□ -0.81
CHFR-216ENST00000538235 SLC24A4Q8NFF2 622 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 PDCD10Q9BUL8 212 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 SELENOKQ9Y6D0 94 aa9.98□□□□□ -0.81
CHFR-216ENST00000538235 C7orf66A4D0T2 115 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 H3BP45 60 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 OVOL1O14753 267 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 SIX6O95475 246 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 ARL3P36405 182 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 ID3Q02535 119 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 IAH1Q2TAA2 248 aaPredicted RBP9.97□□□□□ -0.81
CHFR-216ENST00000538235 C2orf83Q53S99 150 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 PLET1Q6UQ28 207 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 CACNG8Q8WXS5 425 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 EEF1AKMT3Q96AZ1 226 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 PINX1Q96BK5 328 aaKnown RBP9.97□□□□□ -0.81
CHFR-216ENST00000538235 RANGRFQ9HD47 186 aaPredicted RBP9.97□□□□□ -0.81
CHFR-216ENST00000538235 HEYLQ9NQ87 328 aaPredicted RBP9.97□□□□□ -0.81
CHFR-216ENST00000538235 C21orf62Q9NYP8 219 aa9.97□□□□□ -0.81
CHFR-216ENST00000538235 IGHV3OR16-8A0A075B7F1 116 aa9.96□□□□□ -0.82
CHFR-216ENST00000538235 TGOLN2O43493 480 aa9.96□□□□□ -0.82
CHFR-216ENST00000538235 WIPF1O43516 503 aa9.96□□□□□ -0.82
CHFR-216ENST00000538235 DHFRP00374 187 aa9.96□□□□□ -0.82
CHFR-216ENST00000538235 MBPP02686 304 aaPredicted RBP9.96□□□□□ -0.82
CHFR-216ENST00000538235 CLEC3BP05452 202 aa9.96□□□□□ -0.82
CHFR-216ENST00000538235 NPY1RP25929 384 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms