RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 PLXNA2O75051 1894 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 NLRC5Q86WI3 1866 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 MYO16Q9Y6X6 1858 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SSC5DA1L4H1 1573 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 PLXNB2O15031 1838 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 NSG1A0A0A6YYJ2 146 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PPK0 400 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PPV9 198 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 LRRC30A6NM36 301 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 C15orf62A8K5M9 175 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 FOXI3A8MTJ6 420 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 FNDC10F2Z333 226 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 H3BMG7 143 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SYS1-DBNDD2H3BUS1 97 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SLC17A2O00624 439 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 PLPP3O14495 311 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 VCYO14598 125 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SOCS1O15524 211 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 ST8SIA3O43173 380 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 ANGPTL7O43827 346 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 PITX3O75364 302 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 ZNF737O75373 536 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 DHRS3O75911 302 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 OR7C1O76099 320 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 CA2P00918 260 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 GYPAP02724 150 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 CRYGDP07320 174 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SP9P0CG40 484 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SMIM13P0DJ93 91 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 ATP1B2P14415 290 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 PVRP15151 417 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 ORM2P19652 201 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 NTF3P20783 257 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SFTPDP35247 375 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 G6PCP35575 357 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 GLRXP35754 106 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 RBMXP38159 391 aaKnown RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 ZNF133P52736 654 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 NDUFV3P56181 108 aaKnown RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 UBE2G1P62253 170 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 TNFAIP6P98066 277 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 LAMTOR4Q0VGL1 99 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 IL11RAQ14626 422 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 ZNF146Q15072 292 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 RPEL1Q2QD12 228 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 MS4A18Q3C1V0 323 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 MEIG1Q5JSS6 88 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 DCAF12Q5T6F0 453 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 TMEM211Q6ICI0 200 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SLC25A47Q6Q0C1 308 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 PQLC2Q6ZP29 291 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 FAM19A5Q7Z5A7 132 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 SPATA12Q7Z6I5 190 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 OOSP2Q86WS3 158 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 KRTAP11-1Q8IUC1 163 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 OR2L13Q8N349 312 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 Q8N377 158 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 C8orf31Q8N9H6 132 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 ZFP62Q8NB50 900 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 OR4X2Q8NGF9 303 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 OR8B3Q8NGG8 313 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SCGB1C1Q8TD33 95 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 OR5P3Q8WZ94 311 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 LSM10Q969L4 123 aaKnown RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 FAM3DQ96BQ1 224 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 C10orf35Q96D05 121 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 MMABQ96EY8 250 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 PELI1Q96FA3 418 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 COQ2Q96H96 371 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 ABHD14BQ96IU4 210 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 OR8B2Q96RD0 313 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 FAM103A1Q9BTL3 118 aaKnown RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 PLA2G12AQ9BZM1 189 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 TMEM191AQ9H0A3 160 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SH3BGRL3Q9H299 93 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 IFI27L2Q9H2X8 130 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 CALHM2Q9HA72 323 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 TAAR3PQ9P1P4 343 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 GNG13Q9P2W3 67 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 SLC25A10Q9UBX3 287 aaPredicted RBP1.99□□□□□ -2.09
SKA3-207ENST00000536239 MOB4Q9Y3A3 225 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 HEBP2Q9Y5Z4 205 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 V9GYY9 64 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 DOCK4Q8N1I0 1966 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 TMEM131Q92545 1883 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 LTBP4Q8N2S1 1624 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 THSD7BQ9C0I4 1608 aa1.99□□□□□ -2.09
SKA3-207ENST00000536239 GLI3P10071 1580 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 KCPQ6ZWJ8 1503 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 PLXNB3Q9ULL4 1909 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 A0A087WV48 116 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 A0A1B0GV50 99 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PQF6 199 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PRD5 423 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PRF3 423 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PRM7 423 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 GRIFINA4D1Z8 144 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OR4C46A6NHA9 309 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CASTOR2A6NHX0 329 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 SHISA7A6NL88 538 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms