RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TMEM50AO95807 157 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A15PP0C7V4 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A13PP0C7W8 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A14PP0C7W9 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A24PP0C7X0 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 TMEM155Q4W5P6 130 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 DNM1P46Q6ZS02 220 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 OR4X2Q8NGF9 303 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 SPCS1Q9Y6A9 102 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FOXH1O75593 365 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 ATP5LO75964 103 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 LINC00158P58513 81 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 CDK2AP2O75956 126 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 CD55P08174 381 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 SAXO1Q8IYX7 474 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 H3BUT2 72 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 RAB9AP51151 201 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 PSG7Q13046 419 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 RIPPLY2Q5TAB7 128 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 POC1AQ8NBT0 407 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 DOCK9Q9BZ29 2069 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 PINLYPA6NC86 204 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 HBDP02042 147 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 C2orf68Q2NKX9 166 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 Q9H3A6 140 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
SPG11-203ENST00000535302 TIMM23BQ5SRD1 257 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 BRWD3Q6RI45 1802 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 AKAP6Q13023 2319 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 PSCAO43653 123 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 CST9LQ9H4G1 147 aa10.6□□□□□ -0.71
SPG11-203ENST00000535302 H3BRM9 83 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 ZNF708P17019 499 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 DMRTC2Q8IXT2 367 aaPredicted RBP10.59□□□□□ -0.71
SPG11-203ENST00000535302 WDYHV1Q96HA8 205 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 NPDC1Q9NQX5 325 aaPredicted RBP10.59□□□□□ -0.71
SPG11-203ENST00000535302 MT-ND6P03923 174 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 PRB1P04280 392 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 ZNF688P0C7X2 276 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 COX5BP10606 129 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 TBR1Q16650 682 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 FAM57AQ8TBR7 257 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 FBLIM1Q8WUP2 373 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 NPCDR1Q9BY65 106 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 VCX2Q9H322 139 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 CD8AP01732 235 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 CD200R1LQ6Q8B3 271 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 PTPRFP10586 1907 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 S100A7L2Q5SY68 101 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 SDHCQ99643 169 aaPredicted RBP10.59□□□□□ -0.71
SPG11-203ENST00000535302 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 PLPPR1Q8TBJ4 325 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 COQ2Q96H96 371 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 CHCHD5Q9BSY4 110 aa10.59□□□□□ -0.71
SPG11-203ENST00000535302 IFNL4K9M1U5 179 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 HIGD1CA8MV81 97 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 NRN1LQ496H8 165 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 GATAD1Q8WUU5 269 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 ADAMTS7Q9UKP4 1686 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 LCNL1Q6ZST4 164 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 DEPPQ9NTK1 212 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 ADARB2-AS1A8MUL3 147 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 INS-IGF2F8WCM5 200 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 INSP01308 110 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 GLRXP35754 106 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 SLC25A15Q9Y619 301 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 CACNA1IQ9P0X4 2223 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 CD28P10747 220 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 GTSCR1Q86UQ5 136 aa10.58□□□□□ -0.72
SPG11-203ENST00000535302 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
SPG11-203ENST00000535302 NRXN2Q9P2S2 1712 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 EFEMP2O95967 443 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 DANCRP0C864 163 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 CLDN16Q9Y5I7 305 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 SBF2Q86WG5 1849 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 C1QTNF12Q5T7M4 302 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 IFI27L2Q9H2X8 130 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 PARP14Q460N5 1801 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 TUBGCP6Q96RT7 1819 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 TBX6O95947 436 aaPredicted RBP10.57□□□□□ -0.72
SPG11-203ENST00000535302 ZNF474Q6S9Z5 364 aaPredicted RBP10.57□□□□□ -0.72
SPG11-203ENST00000535302 Q71RC1 249 aaPredicted RBP10.57□□□□□ -0.72
SPG11-203ENST00000535302 TTC9CQ8N5M4 171 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 OR52E5Q8NH55 327 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 C21orf62Q9NYP8 219 aa10.57□□□□□ -0.72
SPG11-203ENST00000535302 PEF1Q9UBV8 284 aaKnown RBP10.57□□□□□ -0.72
SPG11-203ENST00000535302 A0A0G2JK05 382 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 PGPEP1LA6NFU8 196 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 ERVK11-1P61568 191 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 TMEM167AQ8TBQ9 72 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 DPM3Q9P2X0 92 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 SPRR3Q9UBC9 169 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 ABCA7Q8IZY2 2146 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 ADMP35318 185 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.56□□□□□ -0.72
SPG11-203ENST00000535302 RTBDNQ9BSG5 229 aaPredicted RBP10.56□□□□□ -0.72
SPG11-203ENST00000535302 EDA2RQ9HAV5 297 aa10.56□□□□□ -0.72
SPG11-203ENST00000535302 PYYP10082 97 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms