RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 KIAA1109Q2LD37 5005 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 TRPM6Q9BX84 2022 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 HRNRQ86YZ3 2850 aaPredicted RBP1.37□□□□□ -2.19
CD44-233ENST00000531141 MPDZO75970 2070 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 IGHV3OR15-7A0A075B7D8 119 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 C17orf98A8MV24 154 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 J3QLI3 93 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 KCNK1O00180 336 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 BIRC5O15392 142 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 EEF1E1O43324 174 aaKnown RBP1.37□□□□□ -2.19
CD44-233ENST00000531141 MPZL2O60487 215 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 STX10O60499 249 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 PDCD6O75340 191 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 SOX14O95416 240 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 GYPCP04921 128 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 CALB1P05937 261 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 HSD11B1P28845 292 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 S100A2P29034 98 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 PYCR1P32322 319 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 CA5AP35218 305 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 CD79BP40259 229 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 OMPP47874 163 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 IDH3GP51553 393 aaPredicted RBP1.37□□□□□ -2.19
CD44-233ENST00000531141 AQP5P55064 265 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 HBG1P69891 147 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 HBG2P69892 147 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 GLO1Q04760 184 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 MLLT11Q13015 90 aaPredicted RBP1.37□□□□□ -2.19
CD44-233ENST00000531141 ALX1Q15699 326 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 PCOTHQ58A44 107 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 SYPL2Q5VXT5 272 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 LAMTOR1Q6IAA8 161 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 CD200R1LQ6Q8B3 271 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 LRRN1Q6UXK5 716 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 ZNF567Q8N184 647 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 KRTCAP2Q8N6L1 136 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 GATD1Q8NB37 220 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 OR5D18Q8NGL1 313 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 OR4A5Q8NH83 315 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 OR2AE1Q8NHA4 323 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 STOML3Q8TAV4 291 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 KCTD4Q8WVF5 259 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 KLK6Q92876 244 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 DDIT4LQ96D03 193 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 SMIM12Q96EX1 92 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 MRAP2Q96G30 205 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 CCDC42Q96M95 316 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 KCTD7Q96MP8 289 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 GPR22Q99680 433 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 SELENOSQ9BQE4 189 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 GUCA1BQ9UMX6 200 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 TP53TG1Q9Y2A0 90 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 CSMD3Q7Z407 3707 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 ROS1P08922 2347 aa1.37□□□□□ -2.19
CD44-233ENST00000531141 A0A1W2PQL4 384 aaPredicted RBP1.36□□□□□ -2.19
CD44-233ENST00000531141 C21orf140B9A014 251 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 F5H5T6 163 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 F5H768 121 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 TMEM250H0YL14 139 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 CXCR6O00574 342 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 LECT2O14960 151 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 PFDN6O15212 129 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 ATP6V1G2O95670 118 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 KRT75O95678 551 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 CTSEP14091 401 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 ATF1P18846 271 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 MYL12AP19105 171 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 CRABP1P29762 137 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 PPP1R2P41236 205 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 HSPA13P48723 471 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 RAB14P61106 215 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 ERVS71-1P61550 626 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 FAM3AP98173 230 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 PDK2Q15119 407 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 ACSM3Q53FZ2 586 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 FREM1Q5H8C1 2179 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 CLVS2Q5SYC1 327 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 PPP1R2P3Q6NXS1 205 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 FAM173BQ6P4H8 233 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 DGAT2L6Q6ZPD8 337 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 FAM183BPQ6ZVS7 135 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 ZNF767PQ75MW2 155 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 TCF23Q7RTU1 214 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 FAM19A5Q7Z5A7 132 aaPredicted RBP1.36□□□□□ -2.19
CD44-233ENST00000531141 GKN2Q86XP6 184 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 ZBTB8OSQ8IWT0 167 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 BLIDQ8IZY5 108 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 OR10P1Q8NGE3 313 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 OR5B17Q8NGF7 314 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 GPR119Q8TDV5 335 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 CT55Q8WUE5 264 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 PACRGQ96M98 296 aaPredicted RBP1.36□□□□□ -2.19
CD44-233ENST00000531141 TMEM56Q96MV1 263 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 ULBP3Q9BZM4 244 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 AICDAQ9GZX7 198 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 SLC22A4Q9H015 551 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 METTL9Q9H1A3 318 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 TCEAL2Q9H3H9 227 aaPredicted RBP1.36□□□□□ -2.19
CD44-233ENST00000531141 SLC2A9Q9NRM0 540 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 KCNIP2Q9NS61 270 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms