RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 FAM90A13PP0C7W8 464 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 FAM90A14PP0C7W9 464 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 FAM90A24PP0C7X0 464 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST1H2BOP23527 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST1H2BBP33778 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 MPV17P39210 176 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST1H2BDP58876 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 NPC2P61916 151 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST1H2BCP62807 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST2H2BEQ16778 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 MPV17L2Q567V2 206 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-229ENST00000531014 PATE1Q8WXA2 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST1H2BHQ93079 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 LINC01587Q99440 93 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 SPSB2Q99619 263 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST1H2BNQ99877 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HIST1H2BMQ99879 126 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 KLHDC3Q9BQ90 382 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 SELENOKQ9Y6D0 94 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 MYO7AQ13402 2215 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 CGAP01215 116 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 GUSBP1Q15486 140 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 GNB1LQ9BYB4 327 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 SPAG17Q6Q759 2223 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 A0A1W2PR77 199 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 FABP5P3A8MUU1 101 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 B5MCH6 92 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 J3KT08 172 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 CDC42EP2O14613 210 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 NDUFS6O75380 124 aaKnown RBP6.13□□□□□ -1.43
CTNND1-229ENST00000531014 CCL4P13236 92 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 FGF12P61328 243 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 CD69Q07108 199 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 SPATA25Q9BR10 227 aa6.13□□□□□ -1.43
CTNND1-229ENST00000531014 HTN3P15516 51 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 SHISA5Q8N114 240 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 MBNL3Q9NUK0 354 aaKnown RBP6.12□□□□□ -1.43
CTNND1-229ENST00000531014 DIDO1Q9BTC0 2240 aaKnown RBP6.12□□□□□ -1.43
CTNND1-229ENST00000531014 TCF20Q9UGU0 1960 aaKnown RBP6.12□□□□□ -1.43
CTNND1-229ENST00000531014 KNCNA6PVL3 124 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 RPL23P62829 140 aaKnown RBP6.12□□□□□ -1.43
CTNND1-229ENST00000531014 IRF3Q14653 427 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 ABHD12Q8N2K0 398 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 WFDC6Q9BQY6 131 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 CLEC7AQ9BXN2 247 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 TNFRSF12AQ9NP84 129 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 CALYQ9NYX4 217 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 NPIPB13A6NJU9 1138 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 NPIPB5A8MRT5 1133 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 EGR2P11161 476 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-229ENST00000531014 FOXL1Q12952 345 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 TMEM30BQ3MIR4 351 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 C1QL3Q5VWW1 255 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 OSTCQ9NRP0 149 aa6.12□□□□□ -1.43
CTNND1-229ENST00000531014 SCTP09683 121 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 GFERP55789 205 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 PEAR1Q5VY43 1037 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-229ENST00000531014 HIST3H2BBQ8N257 126 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 ARPC1AQ92747 370 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 PRADC1Q9BSG0 188 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 CHCHD5Q9BSY4 110 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 A0A087X0K7 114 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 IGHG3P01860 377 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 HLA-DQB1P01920 261 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 FSTP19883 344 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 RNASE4P34096 147 aaKnown RBP6.11□□□□□ -1.43
CTNND1-229ENST00000531014 TPRX1Q8N7U7 411 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 LINC00615Q96LM1 132 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-229ENST00000531014 KLHDC2Q9Y2U9 406 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 MRPS18BQ9Y676 258 aaKnown RBP6.11□□□□□ -1.43
CTNND1-229ENST00000531014 MYMXA0A1B0GTQ4 84 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 LIPT2A6NK58 231 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 CD160O95971 181 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 CCL20P78556 96 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 IFITM3Q01628 133 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 EGR4Q05215 589 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 LAGE3Q14657 143 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 FAM90A2PQ658T7 463 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 WFDC5Q8TCV5 224 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 ITLN2Q8WWU7 325 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-229ENST00000531014 IDI2-AS1Q9NZ38 188 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 IGKV1D-42A0A075B6H8 117 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 A0A087WV48 116 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 RAMP1O60894 148 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 PF4P02776 101 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 DRD3P35462 400 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 H2BFSP57053 126 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 FOXL2P58012 376 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 ACTL10Q5JWF8 245 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 CCL13Q99616 98 aa6.11□□□□□ -1.43
CTNND1-229ENST00000531014 TRIP12Q14669 1992 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-229ENST00000531014 A0A0J9YW62 118 aa6.1□□□□□ -1.43
CTNND1-229ENST00000531014 AMBPP02760 352 aa6.1□□□□□ -1.43
CTNND1-229ENST00000531014 ATP5G3P48201 142 aa6.1□□□□□ -1.43
CTNND1-229ENST00000531014 MAP1BP46821 2468 aaKnown RBP6.1□□□□□ -1.43
CTNND1-229ENST00000531014 CACNA1GO43497 2377 aa6.1□□□□□ -1.43
CTNND1-229ENST00000531014 GAGE12HA6NDE8 117 aa6.1□□□□□ -1.43
CTNND1-229ENST00000531014 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
CTNND1-229ENST00000531014 REG1AP05451 166 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms