RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 OR51L1Q8NGJ5 315 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR6K6Q8NGW6 343 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 DOK4Q8TEW6 326 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ABHD3Q8WU67 409 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 RNF133Q8WVZ7 376 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM234Q8WY98 164 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 C11orf40Q8WZ69 217 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ST8SIA1Q92185 356 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 RBMXL1Q96E39 390 aaKnown RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF414Q96IQ9 312 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 AMELYQ99218 206 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 P2RX4Q99571 388 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 EIF5A2Q9GZV4 153 aaKnown RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 PARP12Q9H0J9 701 aaKnown RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 NXF5Q9H1B4 397 aaKnown RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF430Q9H8G1 570 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 LYRM2Q9NU23 88 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 MRPL22Q9NWU5 206 aaKnown RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 GSKIPQ9P0R6 139 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 CKLFQ9UBR5 152 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 HHLA2Q9UM44 414 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 RCL1Q9Y2P8 373 aaKnown RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 PXMP4Q9Y6I8 212 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 R4GMQ9 66 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 EXPH5Q8NEV8 1989 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 USF3Q68DE3 2245 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF407Q9C0G0 2248 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 EML6Q6ZMW3 1958 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 HTTP42858 3142 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CEP350Q5VT06 3117 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGHV1OR15-1A0A075B7D0 117 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGHV5-51A0A0C4DH38 117 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 A0A1W2PNV4 684 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 A0A1W2PRS3 328 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGSF23A1L1A6 192 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM189A5PLL7 270 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 FAM231BA6NCW3 169 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CRYM-AS1A6NIL9 109 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CDIPTO14735 213 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLC16A7O60669 478 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 SMPD2O60906 423 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 PITX3O75364 302 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CDS2O95674 445 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM50AO95807 157 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 TSPAN13O95857 204 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 HRASP01112 189 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGLV3-1P01715 115 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CTSDP07339 412 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 LINC00869P0C866 280 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGLC1P0CG04 106 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 BCL2P10415 239 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CD99P14209 185 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CTLA4P16410 223 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 IL3RAP26951 378 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 ATP6V0CP27449 155 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 GRPRP30550 384 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 GNRHRP30968 328 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 SRP14P37108 136 aaKnown RBP2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 MAGEA5P43359 124 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 DAP3P51398 398 aaKnown RBP2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 TAS2R30P59541 319 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 HIST1H3AP68431 136 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 RPL19P84098 196 aaKnown RBP2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF616Q08AN1 781 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 EGFEM1PQ0D2K5 195 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 Q0VG73 95 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 LAGE3Q14657 143 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 ARL6IP1Q15041 203 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF726P1Q15940 193 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM183BQ1AE95 376 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 PLPPR5Q32ZL2 321 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 GLYATL3Q5SZD4 288 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 DNM1P34Q6PK57 102 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 ERASQ7Z444 233 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 TRAPPC6BQ86SZ2 158 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 MARCH3Q86UD3 253 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 SGPP2Q8IWX5 399 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR5D14Q8NGL3 314 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR4P4Q8NGL7 312 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR5B3Q8NH48 314 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 KCNG3Q8TAE7 436 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 FAM213BQ8TBF2 198 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 PATE1Q8WXA2 126 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 EMG1Q92979 244 aaKnown RBP2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 C10orf35Q96D05 121 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 ABHD14BQ96IU4 210 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 SCGB3A2Q96PL1 93 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CIB3Q96Q77 187 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 KLHDC3Q9BQ90 382 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 TTTY10Q9BZA0 68 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 LPAR5Q9H1C0 372 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 HES4Q9HCC6 221 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 FAM206AQ9NX38 181 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 CLN8Q9UBY8 286 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 UQCR10Q9UDW1 63 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLC22A13Q9Y226 551 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 MEMO1Q9Y316 297 aa2.25□□□□□ -2.05
HMGB1P41-201ENST00000520234 TRAV9-1A0A075B6T8 112 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGHV1OR21-1A0A087WYE8 117 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 BORCS7-ASMTA0A0B4J1R7 106 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms