RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 CCL17Q92583 94 aa2.55□□□□□ -2
NUP54-209ENST00000510569 FRZBQ92765 325 aa2.55□□□□□ -2
NUP54-209ENST00000510569 ISOC1Q96CN7 298 aa2.55□□□□□ -2
NUP54-209ENST00000510569 ADAT3Q96EY9 351 aaPredicted RBP2.55□□□□□ -2
NUP54-209ENST00000510569 PRSS27Q9BQR3 290 aa2.55□□□□□ -2
NUP54-209ENST00000510569 NDFIP1Q9BT67 221 aa2.55□□□□□ -2
NUP54-209ENST00000510569 LPAR5Q9H1C0 372 aa2.55□□□□□ -2
NUP54-209ENST00000510569 OR2D2Q9H210 308 aa2.55□□□□□ -2
NUP54-209ENST00000510569 SRMSQ9H3Y6 488 aa2.55□□□□□ -2
NUP54-209ENST00000510569 TMEM216Q9P0N5 145 aa2.55□□□□□ -2
NUP54-209ENST00000510569 ZNF629Q9UEG4 869 aaPredicted RBP2.55□□□□□ -2
NUP54-209ENST00000510569 BAIAP2Q9UQB8 552 aa2.55□□□□□ -2
NUP54-209ENST00000510569 HS3ST2Q9Y278 367 aa2.55□□□□□ -2
NUP54-209ENST00000510569 SIGLEC7Q9Y286 467 aa2.55□□□□□ -2
NUP54-209ENST00000510569 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
NUP54-209ENST00000510569 MCM3APO60318 1980 aa2.54□□□□□ -2
NUP54-209ENST00000510569 PTPRDP23468 1912 aa2.54□□□□□ -2
NUP54-209ENST00000510569 PATJQ8NI35 1801 aa2.54□□□□□ -2
NUP54-209ENST00000510569 TMED7-TICAM2A0A0A6YYA0 188 aa2.54□□□□□ -2
NUP54-209ENST00000510569 IGHV2-26A0A0B4J1V2 119 aa2.54□□□□□ -2
NUP54-209ENST00000510569 TRAV38-1A0A0B4J264 116 aa2.54□□□□□ -2
NUP54-209ENST00000510569 RIIAD1A6NNX1 92 aa2.54□□□□□ -2
NUP54-209ENST00000510569 KNCNA6PVL3 124 aa2.54□□□□□ -2
NUP54-209ENST00000510569 FABP5P3A8MUU1 101 aa2.54□□□□□ -2
NUP54-209ENST00000510569 M0R143 59 aa2.54□□□□□ -2
NUP54-209ENST00000510569 FFAR1O14842 300 aa2.54□□□□□ -2
NUP54-209ENST00000510569 ANGPTL7O43827 346 aa2.54□□□□□ -2
NUP54-209ENST00000510569 SS18L1O75177 396 aaPredicted RBP2.54□□□□□ -2
NUP54-209ENST00000510569 OR2H2O95918 312 aa2.54□□□□□ -2
NUP54-209ENST00000510569 HLA-DRB1P01911 266 aa2.54□□□□□ -2
NUP54-209ENST00000510569 SOD3P08294 240 aa2.54□□□□□ -2
NUP54-209ENST00000510569 CECR9P0C854 216 aa2.54□□□□□ -2
NUP54-209ENST00000510569 CTLA4P16410 223 aa2.54□□□□□ -2
NUP54-209ENST00000510569 CCL1P22362 96 aa2.54□□□□□ -2
NUP54-209ENST00000510569 CD70P32970 193 aa2.54□□□□□ -2
NUP54-209ENST00000510569 BTCP35070 178 aa2.54□□□□□ -2
NUP54-209ENST00000510569 VDAC2P45880 294 aaPredicted RBP2.54□□□□□ -2
NUP54-209ENST00000510569 P2RX1P51575 399 aa2.54□□□□□ -2
NUP54-209ENST00000510569 CTBP2P56545 445 aa2.54□□□□□ -2
NUP54-209ENST00000510569 HBA1P69905 142 aa2.54□□□□□ -2
NUP54-209ENST00000510569 HIST1H1AQ02539 215 aaPredicted RBP2.54□□□□□ -2
NUP54-209ENST00000510569 LOXL1Q08397 574 aaPredicted RBP2.54□□□□□ -2
NUP54-209ENST00000510569 BTN1A1Q13410 526 aa2.54□□□□□ -2
NUP54-209ENST00000510569 JOSD1Q15040 202 aaPredicted RBP2.54□□□□□ -2
NUP54-209ENST00000510569 MESTQ5EB52 335 aa2.54□□□□□ -2
NUP54-209ENST00000510569 C1orf100Q5SVJ3 147 aa2.54□□□□□ -2
NUP54-209ENST00000510569 KDM4DQ6B0I6 523 aa2.54□□□□□ -2
NUP54-209ENST00000510569 Q6ZRU5 148 aa2.54□□□□□ -2
NUP54-209ENST00000510569 CLEC20AQ6ZU45 233 aa2.54□□□□□ -2
NUP54-209ENST00000510569 SGPP2Q8IWX5 399 aa2.54□□□□□ -2
NUP54-209ENST00000510569 TMEM86AQ8N2M4 240 aa2.54□□□□□ -2
NUP54-209ENST00000510569 ANKRD29Q8N6D5 301 aa2.54□□□□□ -2
NUP54-209ENST00000510569 LY6G5BQ8NDX9 201 aa2.54□□□□□ -2
NUP54-209ENST00000510569 NUP35Q8NFH5 326 aa2.54□□□□□ -2
NUP54-209ENST00000510569 OR51H1Q8NH63 302 aa2.54□□□□□ -2
NUP54-209ENST00000510569 GEMIN6Q8WXD5 167 aaKnown RBP2.54□□□□□ -2
NUP54-209ENST00000510569 TMEM106AQ96A25 262 aa2.54□□□□□ -2
NUP54-209ENST00000510569 SLC25A44Q96H78 314 aaPredicted RBP2.54□□□□□ -2
NUP54-209ENST00000510569 IP6K3Q96PC2 410 aa2.54□□□□□ -2
NUP54-209ENST00000510569 SPACA5Q96QH8 159 aa2.54□□□□□ -2
NUP54-209ENST00000510569 PSMG3Q9BT73 122 aaPredicted RBP2.54□□□□□ -2
NUP54-209ENST00000510569 EIF5A2Q9GZV4 153 aaKnown RBP2.54□□□□□ -2
NUP54-209ENST00000510569 TAF9BQ9HBM6 251 aa2.54□□□□□ -2
NUP54-209ENST00000510569 MED11Q9P086 117 aa2.54□□□□□ -2
NUP54-209ENST00000510569 CLCF1Q9UBD9 225 aa2.54□□□□□ -2
NUP54-209ENST00000510569 SLC23A2Q9UGH3 650 aa2.54□□□□□ -2
NUP54-209ENST00000510569 LAMTOR3Q9UHA4 124 aa2.54□□□□□ -2
NUP54-209ENST00000510569 NAT8BQ9UHF3 227 aa2.54□□□□□ -2
NUP54-209ENST00000510569 LAMTOR2Q9Y2Q5 125 aa2.54□□□□□ -2
NUP54-209ENST00000510569 FIS1Q9Y3D6 152 aa2.54□□□□□ -2
NUP54-209ENST00000510569 ENPP4Q9Y6X5 453 aa2.54□□□□□ -2
NUP54-209ENST00000510569 SHROOM3Q8TF72 1996 aa2.54□□□□□ -2
NUP54-209ENST00000510569 LRP4O75096 1905 aa2.54□□□□□ -2
NUP54-209ENST00000510569 TMEM131Q92545 1883 aa2.54□□□□□ -2
NUP54-209ENST00000510569 PCM1Q15154 2024 aa2.53□□□□□ -2
NUP54-209ENST00000510569 PHF3Q92576 2039 aaKnown RBP2.53□□□□□ -2
NUP54-209ENST00000510569 MYLKQ15746 1914 aa2.53□□□□□ -2
NUP54-209ENST00000510569 ALPK3Q96L96 1907 aa2.53□□□□□ -2
NUP54-209ENST00000510569 TRBV19A0A075B6N1 114 aa2.53□□□□□ -2
NUP54-209ENST00000510569 TRAV8-3A0A0A6YYJ7 113 aa2.53□□□□□ -2
NUP54-209ENST00000510569 TRAV4A0A0B4J268 109 aa2.53□□□□□ -2
NUP54-209ENST00000510569 LOC102725191A0A1B0GVB3 256 aa2.53□□□□□ -2
NUP54-209ENST00000510569 TMEM269A0A1B0GVZ9 245 aa2.53□□□□□ -2
NUP54-209ENST00000510569 DUXBA0A1W2PPF3 345 aa2.53□□□□□ -2
NUP54-209ENST00000510569 C9JAW5 83 aa2.53□□□□□ -2
NUP54-209ENST00000510569 F5H5P2 479 aa2.53□□□□□ -2
NUP54-209ENST00000510569 H3BP45 60 aa2.53□□□□□ -2
NUP54-209ENST00000510569 APOC4-APOC2K7ER74 178 aa2.53□□□□□ -2
NUP54-209ENST00000510569 M0R2Z0 102 aa2.53□□□□□ -2
NUP54-209ENST00000510569 UPK1AO00322 258 aa2.53□□□□□ -2
NUP54-209ENST00000510569 KCNK2O95069 426 aa2.53□□□□□ -2
NUP54-209ENST00000510569 ZNF682O95780 498 aa2.53□□□□□ -2
NUP54-209ENST00000510569 IFNA7P01567 189 aa2.53□□□□□ -2
NUP54-209ENST00000510569 IGKV1-17P01599 117 aa2.53□□□□□ -2
NUP54-209ENST00000510569 APOC2P02655 101 aa2.53□□□□□ -2
NUP54-209ENST00000510569 OPN1SWP03999 348 aa2.53□□□□□ -2
NUP54-209ENST00000510569 OR12D1P0DN82 309 aa2.53□□□□□ -2
NUP54-209ENST00000510569 RPL22P35268 128 aaKnown RBP2.53□□□□□ -2
NUP54-209ENST00000510569 PPP1CCP36873 323 aaKnown RBP2.53□□□□□ -2
NUP54-209ENST00000510569 ZNF136P52737 540 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms