RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 ABCA1O95477 2261 aa8.86□□□□□ -0.99
LIN54-207ENST00000508171 TRAV5A0A0B4J249 113 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 HELTA6NFD8 242 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 CGB1A6NKQ9 187 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 ZNF705GA8MUZ8 300 aaPredicted RBP8.85□□□□□ -0.99
LIN54-207ENST00000508171 APOA2P02652 100 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 ADMP35318 185 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 PKIAP61925 76 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 ZNF90Q03938 601 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 PRR30Q53SZ7 412 aaPredicted RBP8.85□□□□□ -0.99
LIN54-207ENST00000508171 DNLZQ5SXM8 178 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 GFRALQ6UXV0 394 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 OR1L8Q8NGR8 309 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 OR10X1Q8NGY0 326 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 C14orf144Q96I85 54 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 CTSZQ9UBR2 303 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 TLN1Q9Y490 2541 aaKnown RBP8.85□□□□□ -0.99
LIN54-207ENST00000508171 GRIFINA4D1Z8 144 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 CBLN1P23435 193 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 DLX1P56177 255 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 SUMO1P63165 101 aaKnown RBP8.85□□□□□ -0.99
LIN54-207ENST00000508171 WT1-ASQ06250 92 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 TMEM30BQ3MIR4 351 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 TMEM106BQ9NUM4 274 aa8.85□□□□□ -0.99
LIN54-207ENST00000508171 TECRQ9NZ01 308 aaKnown RBP8.85□□□□□ -0.99
LIN54-207ENST00000508171 GGTLC3B5MD39 225 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 TNFRSF13BO14836 293 aaPredicted RBP8.84□□□□□ -0.99
LIN54-207ENST00000508171 ERVFC1-1P60608 527 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 TMEM177Q53S58 311 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 PQLC2Q6ZP29 291 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 ZNF664Q8N3J9 261 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 GBGT1Q8N5D6 347 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 SLC35E1Q96K37 410 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 SLC25A33Q9BSK2 321 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 IL36BQ9NZH7 164 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 C9JCJ5 164 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 NDUFB3O43676 98 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 OR5G3P0C626 314 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 DDTP30046 118 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 ERHP84090 104 aaKnown RBP8.84□□□□□ -0.99
LIN54-207ENST00000508171 PRB3Q04118 309 aaPredicted RBP8.84□□□□□ -0.99
LIN54-207ENST00000508171 CENPWQ5EE01 88 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 ZNF600Q6ZNG1 722 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 MRPL41Q8IXM3 137 aaKnown RBP8.84□□□□□ -0.99
LIN54-207ENST00000508171 RNASE6Q93091 150 aaKnown RBP8.84□□□□□ -0.99
LIN54-207ENST00000508171 TMEM18Q96B42 140 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 FNDC4Q9H6D8 234 aaPredicted RBP8.84□□□□□ -0.99
LIN54-207ENST00000508171 TMEM167BQ9NRX6 74 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 JKAMPQ9P055 326 aa8.84□□□□□ -0.99
LIN54-207ENST00000508171 MALRD1Q5VYJ5 2156 aa8.83□□□□□ -1
LIN54-207ENST00000508171 A0A087X0M5 115 aa8.83□□□□□ -1
LIN54-207ENST00000508171 A0A1B0GX30 115 aa8.83□□□□□ -1
LIN54-207ENST00000508171 TSTD3H0UI37 97 aa8.83□□□□□ -1
LIN54-207ENST00000508171 GATCO43716 136 aaKnown RBP8.83□□□□□ -1
LIN54-207ENST00000508171 SNRPCP09234 159 aaKnown RBP8.83□□□□□ -1
LIN54-207ENST00000508171 GNG4P50150 75 aa8.83□□□□□ -1
LIN54-207ENST00000508171 YPEL3P61236 119 aaPredicted RBP8.83□□□□□ -1
LIN54-207ENST00000508171 ASPHD1Q5U4P2 390 aa8.83□□□□□ -1
LIN54-207ENST00000508171 OR4C13Q8NGP0 309 aa8.83□□□□□ -1
LIN54-207ENST00000508171 ST6GALNAC6Q969X2 333 aa8.83□□□□□ -1
LIN54-207ENST00000508171 RNASE7Q9H1E1 156 aaKnown RBP8.83□□□□□ -1
LIN54-207ENST00000508171 TPSG1Q9NRR2 321 aa8.83□□□□□ -1
LIN54-207ENST00000508171 V9GYV3 84 aa8.83□□□□□ -1
LIN54-207ENST00000508171 IGHV3-72A0A0B4J1Y9 119 aa8.83□□□□□ -1
LIN54-207ENST00000508171 SPINK4O60575 86 aa8.83□□□□□ -1
LIN54-207ENST00000508171 IGLV2-23P01705 113 aa8.83□□□□□ -1
LIN54-207ENST00000508171 REG1AP05451 166 aa8.83□□□□□ -1
LIN54-207ENST00000508171 USF1P22415 310 aaPredicted RBP8.83□□□□□ -1
LIN54-207ENST00000508171 LOXP28300 417 aaPredicted RBP8.83□□□□□ -1
LIN54-207ENST00000508171 LRRC10Q5BKY1 277 aa8.83□□□□□ -1
LIN54-207ENST00000508171 ZNF430Q9H8G1 570 aaPredicted RBP8.83□□□□□ -1
LIN54-207ENST00000508171 MRPL36Q9P0J6 103 aaKnown RBP8.83□□□□□ -1
LIN54-207ENST00000508171 PSMB11A5LHX3 300 aa8.82□□□□□ -1
LIN54-207ENST00000508171 E7EQL1 145 aa8.82□□□□□ -1
LIN54-207ENST00000508171 DLL1O00548 723 aa8.82□□□□□ -1
LIN54-207ENST00000508171 GCGP01275 180 aa8.82□□□□□ -1
LIN54-207ENST00000508171 ATP5IP56385 69 aaPredicted RBP8.82□□□□□ -1
LIN54-207ENST00000508171 LGALS4P56470 323 aa8.82□□□□□ -1
LIN54-207ENST00000508171 RUSC1-AS1Q66K80 236 aa8.82□□□□□ -1
LIN54-207ENST00000508171 MMD2Q8IY49 270 aa8.82□□□□□ -1
LIN54-207ENST00000508171 TMEM167AQ8TBQ9 72 aa8.82□□□□□ -1
LIN54-207ENST00000508171 NPIPB3Q92617 1050 aa8.82□□□□□ -1
LIN54-207ENST00000508171 BTF3L4Q96K17 158 aa8.82□□□□□ -1
LIN54-207ENST00000508171 FAM167A-AS1Q96KT0 104 aa8.82□□□□□ -1
LIN54-207ENST00000508171 SLC25A2Q9BXI2 301 aa8.82□□□□□ -1
LIN54-207ENST00000508171 ABCA4P78363 2273 aa8.82□□□□□ -1
LIN54-207ENST00000508171 SHISA9B4DS77 424 aa8.82□□□□□ -1
LIN54-207ENST00000508171 SLC25A17O43808 307 aa8.82□□□□□ -1
LIN54-207ENST00000508171 C8orf88P0DMB2 117 aa8.82□□□□□ -1
LIN54-207ENST00000508171 CD33P20138 364 aa8.82□□□□□ -1
LIN54-207ENST00000508171 IER3P46695 156 aa8.82□□□□□ -1
LIN54-207ENST00000508171 FXYD3Q14802 87 aa8.82□□□□□ -1
LIN54-207ENST00000508171 OR8I2Q8N0Y5 310 aa8.82□□□□□ -1
LIN54-207ENST00000508171 C11orf42Q8N5U0 333 aa8.82□□□□□ -1
LIN54-207ENST00000508171 CACNG8Q8WXS5 425 aa8.82□□□□□ -1
LIN54-207ENST00000508171 LINC00479Q96M42 142 aa8.82□□□□□ -1
LIN54-207ENST00000508171 CHODLQ9H9P2 273 aa8.82□□□□□ -1
LIN54-207ENST00000508171 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
LIN54-207ENST00000508171 TP53TG3Q9ULZ0 132 aa8.82□□□□□ -1
LIN54-207ENST00000508171 LY96Q9Y6Y9 160 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms