RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ACY3Q96HD9 319 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 VKORC1Q9BQB6 163 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 YTHDF2Q9Y5A9 579 aaKnown RBP11.75□□□□□ -0.53
DDX41-208ENST00000507955 MAP1AP78559 2803 aaPredicted RBP11.75□□□□□ -0.53
DDX41-208ENST00000507955 RBPJQ06330 500 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 TMEM144Q7Z5S9 345 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 OR9G1Q8NH87 305 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 PRNDQ9UKY0 176 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 REG1AP05451 166 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 LGALS4P56470 323 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
DDX41-208ENST00000507955 MEF2CQ06413 473 aaPredicted RBP11.74□□□□□ -0.53
DDX41-208ENST00000507955 POU2AF1Q16633 256 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 MIR17HGQ75NE6 70 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 C11orf42Q8N5U0 333 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 OR4P4Q8NGL7 312 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 OR2T6Q8NHC8 308 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 SPTAN1Q13813 2472 aaKnown RBP11.74□□□□□ -0.53
DDX41-208ENST00000507955 SCO2A0A1W2PP80 73 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 ZNF705GA8MUZ8 300 aaPredicted RBP11.74□□□□□ -0.53
DDX41-208ENST00000507955 A8MWP6 167 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 CCL21O00585 134 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 PDE6DO43924 150 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 MPDU1O75352 247 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 CD3EP07766 207 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 SNRPCP09234 159 aaKnown RBP11.74□□□□□ -0.53
DDX41-208ENST00000507955 STAG3L2P0CL84 134 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 STAG3L3P0CL85 134 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 APOBEC3AP31941 199 aaPredicted RBP11.74□□□□□ -0.53
DDX41-208ENST00000507955 SSX2Q16385 188 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 RAB1CQ92928 201 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 FLYWCH2Q96CP2 140 aaKnown RBP11.74□□□□□ -0.53
DDX41-208ENST00000507955 KCNIP2Q9NS61 270 aa11.74□□□□□ -0.53
DDX41-208ENST00000507955 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
DDX41-208ENST00000507955 NUPR1O60356 82 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 OR5AN1Q8NGI8 311 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 MSRB2Q9Y3D2 182 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 A0A0U1RQK1 487 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 ZNF320A2RRD8 509 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 APOA2P02652 100 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 LINC00869P0C866 280 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 TMEM249Q2WGJ8 235 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 TMEM256Q8N2U0 113 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 NABP2Q9BQ15 211 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 COMMD5Q9GZQ3 224 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 NGBQ9NPG2 151 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 CGB1A6NKQ9 187 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 VSTM5A8MXK1 200 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 SLC25A17O43808 307 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 RNASE2P10153 161 aaKnown RBP11.73□□□□□ -0.53
DDX41-208ENST00000507955 CNTFRP26992 372 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 CNN1P51911 297 aaKnown RBP11.73□□□□□ -0.53
DDX41-208ENST00000507955 DLX6P56179 175 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 RUSC1-AS1Q66K80 236 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 KCNIP4Q6PIL6 250 aa11.73□□□□□ -0.53
DDX41-208ENST00000507955 CELSR1Q9NYQ6 3014 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 OR10J1P30954 320 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 RPL8P62917 257 aaKnown RBP11.72□□□□□ -0.53
DDX41-208ENST00000507955 WT1-ASQ06250 92 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 LHFPL4Q7Z7J7 247 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 MUC15Q8N387 334 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 MISP3Q96FF7 219 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 SFRP2Q96HF1 295 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 BET1LQ9NYM9 111 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 IGHV1-8P0DP01 117 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 LCN2P80188 198 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 SGMS2Q8NHU3 365 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 ST6GALNAC6Q969X2 333 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 ZNF430Q9H8G1 570 aaPredicted RBP11.72□□□□□ -0.53
DDX41-208ENST00000507955 ZNF257Q9Y2Q1 563 aa11.72□□□□□ -0.53
DDX41-208ENST00000507955 OR10J4P0C629 311 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 CD99P14209 185 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 GCHFRP30047 84 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 PRR20EP86478 221 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 PRR20CP86479 221 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 PRR20DP86480 221 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 PRR20BP86481 221 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 PRR20AP86496 221 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 MORN5Q5VZ52 161 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 NDUFA4L2Q9NRX3 87 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 TRAPPC1Q9Y5R8 145 aa11.71□□□□□ -0.53
DDX41-208ENST00000507955 HIVEP3Q5T1R4 2406 aa11.71□□□□□ -0.54
DDX41-208ENST00000507955 CXorf1O96002 111 aa11.71□□□□□ -0.54
DDX41-208ENST00000507955 GCGP01275 180 aa11.71□□□□□ -0.54
DDX41-208ENST00000507955 IGLV2-23P01705 113 aa11.71□□□□□ -0.54
DDX41-208ENST00000507955 TGIF2LXQ8IUE1 241 aa11.71□□□□□ -0.54
DDX41-208ENST00000507955 OCC1Q8TAD7 63 aa11.71□□□□□ -0.54
DDX41-208ENST00000507955 OSR1Q8TAX0 266 aaPredicted RBP11.71□□□□□ -0.54
DDX41-208ENST00000507955 IGHV3-21A0A0B4J1V1 117 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 K7EN84 100 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
DDX41-208ENST00000507955 NHLH1Q02575 133 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 HLA-DRB5Q30154 266 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
DDX41-208ENST00000507955 OR4C13Q8NGP0 309 aa11.7□□□□□ -0.54
DDX41-208ENST00000507955 MRPL36Q9P0J6 103 aaKnown RBP11.7□□□□□ -0.54
DDX41-208ENST00000507955 SLC45A2Q9UMX9 530 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms