RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 OR12D2P58182 307 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 ELF3P78545 371 aaPredicted RBP3.19□□□□□ -1.9
HERC4-213ENST00000506515 OR8G1Q15617 311 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 ATP6V1FQ16864 119 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 FAM27D1Q5T7N8 215 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 PRR9Q5T870 116 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 TEX36Q5VZQ5 186 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 DNM1P34Q6PK57 102 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 ASCL4Q6XD76 172 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 CLECL1Q8IZS7 167 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 LYPD1Q8N2G4 141 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 LINC00469Q8N7U9 141 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 SLC25A29Q8N8R3 303 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 ZNF420Q8TAQ5 688 aaPredicted RBP3.19□□□□□ -1.9
HERC4-213ENST00000506515 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.19□□□□□ -1.9
HERC4-213ENST00000506515 LZICQ8WZA0 190 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 HDHD2Q9H0R4 259 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 TXNIPQ9H3M7 391 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 GAL3ST2Q9H3Q3 398 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 TBL2Q9Y4P3 447 aaKnown RBP3.19□□□□□ -1.9
HERC4-213ENST00000506515 TENM2Q9NT68 2774 aa3.19□□□□□ -1.9
HERC4-213ENST00000506515 TRAPPC13A5PLN9 417 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 ASAH2BP0C7U1 165 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 CRABP1P29762 137 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 PRSS3P35030 304 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 ERFP50548 548 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 RPL14P50914 215 aaKnown RBP3.18□□□□□ -1.9
HERC4-213ENST00000506515 CAV3P56539 151 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 OR2T2Q6IF00 324 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 PRSS54Q6PEW0 395 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 ORMDL3Q8N138 153 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 OR13D1Q8NGV5 346 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 OR8S1Q8NH09 359 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 OR51A7Q8NH64 312 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 OR5K1Q8NHB7 308 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 SPTSSAQ969W0 71 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 C1orf50Q9BV19 199 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 MED31Q9Y3C7 131 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 SOX21Q9Y651 276 aaPredicted RBP3.18□□□□□ -1.9
HERC4-213ENST00000506515 ENPP4Q9Y6X5 453 aa3.18□□□□□ -1.9
HERC4-213ENST00000506515 IGKV1D-42A0A075B6H8 117 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 LOC102724200A0A096LPH7 203 aaPredicted RBP3.17□□□□□ -1.9
HERC4-213ENST00000506515 GGT3PA6NGU5 568 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 F5H5P2 479 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 J3QT63 122 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 BIRC5O15392 142 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 SYNGR1O43759 233 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 OPN1SWP03999 348 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 MAS1P04201 325 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 SERPINE1P05121 402 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 GNRHRP30968 328 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 GALR1P47211 349 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 CDK6Q00534 326 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 IL5RAQ01344 420 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 IFFO1Q0D2I5 559 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 MINOS1Q5TGZ0 78 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 OR5AS1Q8N127 324 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 NDNFQ8TB73 568 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 H1FXQ92522 213 aaKnown RBP3.17□□□□□ -1.9
HERC4-213ENST00000506515 CENPNQ96H22 339 aaPredicted RBP3.17□□□□□ -1.9
HERC4-213ENST00000506515 RNF170Q96K19 258 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 LYSTQ99698 3801 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 RTBDNQ9BSG5 229 aaPredicted RBP3.17□□□□□ -1.9
HERC4-213ENST00000506515 RASL12Q9NYN1 266 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 GLS2Q9UI32 602 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 ANGPT4Q9Y264 503 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 POLR1DQ9Y2S0 133 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 GMEB1Q9Y692 573 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 MINOS1-NBL1R4GNA1 71 aa3.17□□□□□ -1.9
HERC4-213ENST00000506515 DNAH7Q8WXX0 4024 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 DNAH1Q9P2D7 4330 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 IGHV3OR16-8A0A075B7F1 116 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 TMEM210A6NLX4 147 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 CD300LBA8K4G0 201 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 A8MWL6 223 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 H7C2Y5 167 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 BHLHE40O14503 412 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 GYPAP02724 150 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 RBP4P02753 201 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 BGNP21810 368 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 ALDH3A1P30838 453 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 RBX1P62877 108 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 RPL31P62899 125 aaKnown RBP3.16□□□□□ -1.9
HERC4-213ENST00000506515 GRB2P62993 217 aaKnown RBP3.16□□□□□ -1.9
HERC4-213ENST00000506515 RPL18Q07020 188 aaKnown RBP3.16□□□□□ -1.9
HERC4-213ENST00000506515 BTN1A1Q13410 526 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 WHAMMP3Q1A5X7 153 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 CLEC12AQ5QGZ9 265 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 C6orf183Q5T699 404 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 EPGNQ6UW88 154 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 CCDC121Q6ZUS5 278 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 OLIG3Q7RTU3 272 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 PDZD9Q8IXQ8 264 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 TNFRSF14Q92956 283 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 MRPL48Q96GC5 212 aaKnown RBP3.16□□□□□ -1.9
HERC4-213ENST00000506515 TSNAXQ99598 290 aaKnown RBP3.16□□□□□ -1.9
HERC4-213ENST00000506515 NSRP1Q9H0G5 558 aaKnown RBP3.16□□□□□ -1.9
HERC4-213ENST00000506515 LINC00574Q9H8X3 128 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms