RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	OR13F1	Q8NGS4	319 aa		11.99	□□□□□ -0.49
SUPT20H-223	ENST00000497318	TMEM56	Q96MV1	263 aa		11.99	□□□□□ -0.49
SUPT20H-223	ENST00000497318	SLC5A7	Q9GZV3	580 aa		11.99	□□□□□ -0.49
SUPT20H-223	ENST00000497318	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	ST8SIA3	O43173	380 aa		11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	SNAPC5	O75971	98 aa		11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	BORCS5	Q969J3	196 aa		11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	NXF2	Q9GZY0	626 aa	Known RBP	11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	TMEM231	Q9H6L2	316 aa		11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	FKBP11	Q9NYL4	201 aa		11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	TBC1D24	Q9ULP9	559 aa		11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	OR51B2	Q9Y5P1	312 aa		11.98	□□□□□ -0.49
SUPT20H-223	ENST00000497318	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	FXYD4	P59646	89 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	AADACL3	Q5VUY0	350 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	HOGA1	Q86XE5	327 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	ZNF575	Q86XF7	245 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	UBE2DNL	Q8IWF7	75 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	OR1P1	Q8NH06	330 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	OR51H1	Q8NH63	302 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	FCGR1B	Q92637	280 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	SLC25A46	Q96AG3	418 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	ZNF414	Q96IQ9	312 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	AUNIP	Q9H7T9	357 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	TMEM14B	Q9NUH8	114 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	RABAC1	Q9UI14	185 aa		11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	DYNC1H1	Q14204	4646 aa	Known RBP	11.97	□□□□□ -0.49
SUPT20H-223	ENST00000497318	MARCH11	A6NNE9	402 aa		11.96	□□□□□ -0.49
SUPT20H-223	ENST00000497318	PPY	P01298	95 aa		11.96	□□□□□ -0.49
SUPT20H-223	ENST00000497318	GIG44	P09565	113 aa	Predicted RBP	11.96	□□□□□ -0.49
SUPT20H-223	ENST00000497318	C12orf74	Q32Q52	190 aa		11.96	□□□□□ -0.49
SUPT20H-223	ENST00000497318	TRPT1	Q86TN4	253 aa	Known RBP	11.96	□□□□□ -0.49
SUPT20H-223	ENST00000497318	VSIR	Q9H7M9	311 aa		11.96	□□□□□ -0.49
SUPT20H-223	ENST00000497318	PRND	Q9UKY0	176 aa		11.96	□□□□□ -0.49
SUPT20H-223	ENST00000497318		X6R8D5	127 aa		11.96	□□□□□ -0.49
SUPT20H-223	ENST00000497318	PKD1	P98161	4303 aa		11.95	□□□□□ -0.5
SUPT20H-223	ENST00000497318	GNG7	O60262	68 aa		11.95	□□□□□ -0.5
SUPT20H-223	ENST00000497318	ZNF818P	Q6ZRF7	136 aa		11.95	□□□□□ -0.5
SUPT20H-223	ENST00000497318	CADM3	Q8N126	398 aa		11.95	□□□□□ -0.5
SUPT20H-223	ENST00000497318	TSPAN14	Q8NG11	270 aa		11.95	□□□□□ -0.5
SUPT20H-223	ENST00000497318	ST8SIA2	Q92186	375 aa		11.95	□□□□□ -0.5
SUPT20H-223	ENST00000497318	MISP3	Q96FF7	219 aa		11.95	□□□□□ -0.5
SUPT20H-223	ENST00000497318	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.95	□□□□□ -0.5
SUPT20H-223	ENST00000497318	TOMM20L	Q6UXN7	152 aa		11.94	□□□□□ -0.5
SUPT20H-223	ENST00000497318	TMEM17	Q86X19	198 aa		11.94	□□□□□ -0.5
SUPT20H-223	ENST00000497318	IGLV2-18	A0A075B6J9	118 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318		A0A1W2PS18	150 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318		I3L2K1	104 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	CDK2AP2	O75956	126 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	KRAS	P01116	189 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	NPBWR1	P48145	328 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	LSM3	P62310	102 aa	Known RBP	11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	C1orf134	Q5TEV5	83 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318		Q6ZR54	194 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	MOB3A	Q96BX8	217 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	GRAMD2B	Q96HH9	432 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	FAM210B	Q96KR6	192 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	TSC22D3	Q99576	134 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318		Q9H521	79 aa		11.93	□□□□□ -0.5
SUPT20H-223	ENST00000497318	MT-CO2	P00403	227 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	F2R	P25116	425 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	RPS19	P39019	145 aa	Known RBP	11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	RFX2	P48378	723 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	NUTF2	P61970	127 aa	Known RBP	11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	ZNF767P	Q75MW2	155 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	LILRB2	Q8N423	598 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	FAM24B	Q8N5W8	94 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	MAPKAPK5-AS1	Q8N8E1	139 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	OR5AP2	Q8NGF4	316 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	C1QTNF4	Q9BXJ3	329 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	CLEC5A	Q9NY25	188 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	CELA1	Q9UNI1	258 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	NSG2	Q9Y328	171 aa		11.92	□□□□□ -0.5
SUPT20H-223	ENST00000497318	IGHV3-66	A0A0C4DH42	116 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	C16orf90	A8MZG2	172 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	PMP2	P02689	132 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	APOH	P02749	345 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	CD74	P04233	296 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	C4BPB	P20851	252 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	NPPC	P23582	126 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	GNRHR	P30968	328 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	HERV-K104	P61576	105 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	RNF212	Q495C1	297 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	ACTL10	Q5JWF8	245 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	ZNF600	Q6ZNG1	722 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	STXBP6	Q8NFX7	210 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	NARS2	Q96I59	477 aa	Known RBP	11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	DIABLO	Q9NR28	239 aa		11.91	□□□□□ -0.5
SUPT20H-223	ENST00000497318	KNCN	A6PVL3	124 aa		11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318		K7EQG2	157 aa		11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318	SPART-AS1	P0CW21	52 aa		11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318	LPAR6	P43657	344 aa		11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318	SCAND1	P57086	179 aa		11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318		Q6ZRM9	215 aa		11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318	CSNK1G2-AS1	Q8NCQ2	148 aa		11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318	PINX1	Q96BK5	328 aa	Known RBP	11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318	EHF	Q9NZC4	300 aa		11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
SUPT20H-223	ENST00000497318		A0A0A6YYH2	397 aa		11.89	□□□□□ -0.51
SUPT20H-223	ENST00000497318		A6NJ64	397 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms