RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 COX6A1P12074 109 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 EIF2B2P49770 351 aaKnown RBP0.76□□□□□ -2.29
SMC4-223ENST00000493695 SULT1A1P50225 295 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 PSME3P61289 254 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 UBE2IP63279 158 aaKnown RBP0.76□□□□□ -2.29
SMC4-223ENST00000493695 HBA1P69905 142 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 HIST2H3PS2Q5TEC6 136 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 IQCF2Q8IXL9 164 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 OR4D11Q8NGI4 311 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 AQP3Q92482 292 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 ARL5BQ96KC2 179 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 C20orf27Q9GZN8 174 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 PRTFDC1Q9NRG1 225 aa0.76□□□□□ -2.29
SMC4-223ENST00000493695 RIC1Q4ADV7 1423 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 IGKV1D-42A0A075B6H8 117 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 PQLC2LA1A4F0 135 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 C19orf84I3L1E1 186 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 PSMD12O00232 456 aaPredicted RBP0.75□□□□□ -2.29
SMC4-223ENST00000493695 FAAHO00519 579 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 SERPINA6P08185 405 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 CD79AP11912 226 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 RPL5P46777 297 aaKnown RBP0.75□□□□□ -2.29
SMC4-223ENST00000493695 PRB3Q04118 309 aaPredicted RBP0.75□□□□□ -2.29
SMC4-223ENST00000493695 PDE6HQ13956 83 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 CCDC122Q5T0U0 273 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 TEX36Q5VZQ5 186 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 C8orf74Q6P047 294 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 AAED1Q7RTV5 226 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 OR4C6Q8NH72 309 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 MCFD2Q8NI22 146 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 H1FXQ92522 213 aaKnown RBP0.75□□□□□ -2.29
SMC4-223ENST00000493695 TOMM6Q96B49 74 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 PPP1R2P1Q96PQ5 205 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 ODF3Q96PU9 254 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 SERPINI1Q99574 410 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 MIXL1Q9H2W2 232 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 TRABDQ9H4I3 376 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 OR5AC2Q9NZP5 309 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 TMEM56-RWDD3S4R434 201 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 KIF13BQ9NQT8 1826 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 HECW1Q76N89 1606 aa0.75□□□□□ -2.29
SMC4-223ENST00000493695 TECTAO75443 2155 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 ADCY9O60503 1353 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 CCDC88AQ3V6T2 1871 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 LOC110117498A0A087WWA1 95 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 IGKV2D-26A0A0A0MRZ7 120 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 FUOMA2VDF0 154 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 DPRXA6NFQ7 191 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 BUB1B-PAK6H3BSN5 160 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 MIFP14174 115 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 RPS20P60866 119 aaKnown RBP0.74□□□□□ -2.29
SMC4-223ENST00000493695 PTRHD1Q6GMV3 140 aaKnown RBP0.74□□□□□ -2.29
SMC4-223ENST00000493695 C11orf68Q9H3H3 251 aaKnown RBP0.74□□□□□ -2.29
SMC4-223ENST00000493695 PARVGQ9HBI0 331 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 VPS29Q9UBQ0 182 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 POLEQ07864 2286 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 ADGRB2O60241 1585 aa0.74□□□□□ -2.29
SMC4-223ENST00000493695 PLB1Q6P1J6 1458 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 ROBO3Q96MS0 1386 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 EXOC1LA0A1B0GW35 172 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 CLDN24A6NM45 220 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 GOLGA6L19H0YKK7 550 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 GEMIN2O14893 280 aaKnown RBP0.73□□□□□ -2.29
SMC4-223ENST00000493695 OR2T1O43869 369 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 OR5F1O95221 314 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 IFNA10P01566 189 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 TTRP02766 147 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 CRYGAP11844 174 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 FKBP2P26885 142 aaKnown RBP0.73□□□□□ -2.29
SMC4-223ENST00000493695 CDC42P60953 191 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 KCNJ8Q15842 424 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 DEFB115Q30KQ5 88 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 LPCAT3Q6P1A2 487 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 MIR17HGQ75NE6 70 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 C12orf45Q8N5I9 185 aaPredicted RBP0.73□□□□□ -2.29
SMC4-223ENST00000493695 CLDN22Q8N7P3 220 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 WFDC11Q8NEX6 87 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 OR8J2Q8NGG1 315 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 COMMD5Q9GZQ3 224 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 PKIGQ9Y2B9 76 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 C22orf24Q9Y442 160 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 FBN2P35556 2912 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 ARFGEF3Q5TH69 2177 aa0.73□□□□□ -2.29
SMC4-223ENST00000493695 ALPK2Q86TB3 2170 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 TRAV14DV4A0A0A6YYC5 116 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 TRAV26-2A0A0B4J265 109 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 C2orf70A6NJV1 201 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 KPNA3O00505 521 aaPredicted RBP0.72□□□□□ -2.29
SMC4-223ENST00000493695 FADS1O60427 444 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 OR2J2O76002 312 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 FAM19A2Q8N3H0 131 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 SLC50A1Q9BRV3 221 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 ANAPC1Q9H1A4 1944 aa0.72□□□□□ -2.29
SMC4-223ENST00000493695 DOCK5Q9H7D0 1870 aa0.71□□□□□ -2.3
SMC4-223ENST00000493695 EXPH5Q8NEV8 1989 aa0.71□□□□□ -2.3
SMC4-223ENST00000493695 A0A0D9SG52 128 aa0.71□□□□□ -2.3
SMC4-223ENST00000493695 OR4C46A6NHA9 309 aa0.71□□□□□ -2.3
SMC4-223ENST00000493695 TNNC2P02585 160 aa0.71□□□□□ -2.3
SMC4-223ENST00000493695 ASAH2BP0C7U1 165 aa0.71□□□□□ -2.3
SMC4-223ENST00000493695 SMIM10L2AP0DMW4 78 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms