RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 OR2T10Q8NGZ9 312 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 FLYWCH2Q96CP2 140 aaKnown RBP10.08□□□□□ -0.8
HMGN1-220ENST00000492280 TCEAL7Q9BRU2 100 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 FNDC4Q9H6D8 234 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-220ENST00000492280 ZNF430Q9H8G1 570 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-220ENST00000492280 SRD5A3Q9H8P0 318 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 RAB9BQ9NP90 201 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 ELOVL5Q9NYP7 299 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 JKAMPQ9P055 326 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 ZNF320A2RRD8 509 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 F6UZH7 168 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 PDE6DO43924 150 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 COX7A1P24310 79 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 RHOBP62745 196 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 ZNF90Q03938 601 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 LRRC10Q5BKY1 277 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 SGMS2Q8NHU3 365 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 HIST1H2BLQ99880 126 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 XKRY2A2RUG3 117 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 MOSP00540 346 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 CRYBB3P26998 211 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 SLC35B1P78383 322 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 PRR31Q5SQ13 230 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 PACRGQ96M98 296 aaPredicted RBP10.07□□□□□ -0.8
HMGN1-220ENST00000492280 IMMP2LQ96T52 175 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 LINC00574Q9H8X3 128 aa10.07□□□□□ -0.8
HMGN1-220ENST00000492280 PYYP10082 97 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 POU2AF1Q16633 256 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 SFRP2Q96HF1 295 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 SLC45A2Q9UMX9 530 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 RAXQ9Y2V3 346 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 CRYBG3Q68DQ2 2970 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 IGHV1-69-2A0A0G2JMI3 117 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 RPL29P47914 159 aaKnown RBP10.06□□□□□ -0.8
HMGN1-220ENST00000492280 FXYD3Q14802 87 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 OR51M1Q9H341 326 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 PRO1933Q9H354 126 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 NCOR1P1Q9H4R4 102 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 ZNF835Q9Y2P0 537 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 MDFIC2A0A1B0GVS7 189 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 TGIF2LXQ8IUE1 241 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 OR5AN1Q8NGI8 311 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 LINC00479Q96M42 142 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 PYGO2Q9BRQ0 406 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 GSX1Q9H4S2 264 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-220ENST00000492280 BET1LQ9NYM9 111 aa10.06□□□□□ -0.8
HMGN1-220ENST00000492280 A0A1W2PRD5 423 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 A0A1W2PRF3 423 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 A0A1W2PRM7 423 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 GRIFINA4D1Z8 144 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 H3BTX0 84 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 RAB31Q13636 194 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 C11orf42Q8N5U0 333 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 NPIPB3Q92617 1050 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 NDUFA4L2Q9NRX3 87 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 CSMD2Q7Z408 3487 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 UTP20O75691 2785 aaKnown RBP10.05□□□□□ -0.8
HMGN1-220ENST00000492280 A0A1W2PPI3 338 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 LY86O95711 162 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 IGLV2-23P01705 113 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 AMBPP02760 352 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 IGHV1-8P0DP01 117 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 CD24P25063 80 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 TCL1AP56279 114 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 CD69Q07108 199 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 UNQ6494/PRO21346Q6UXR6 183 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 TMEM144Q7Z5S9 345 aa10.05□□□□□ -0.8
HMGN1-220ENST00000492280 VENTXO95231 258 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 IGHV2-70P01814 119 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 AREGP15514 252 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 CBLN1P23435 193 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 DLX6P56179 175 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 SUMO1P63165 101 aaKnown RBP10.04□□□□□ -0.8
HMGN1-220ENST00000492280 TEX38Q6PEX7 206 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 OSR1Q8TAX0 266 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-220ENST00000492280 ANAPC16Q96DE5 110 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
HMGN1-220ENST00000492280 SSUH2Q9Y2M2 353 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 ZNF257Q9Y2Q1 563 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 CELSR2Q9HCU4 2923 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 GGCTO75223 188 aaKnown RBP10.04□□□□□ -0.8
HMGN1-220ENST00000492280 MEF2CQ06413 473 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-220ENST00000492280 TMEM155Q4W5P6 130 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 CENPWQ5EE01 88 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 OR4C13Q8NGP0 309 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 OR1L8Q8NGR8 309 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 OR1P1Q8NH06 330 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 OR5B3Q8NH48 314 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 CFAP46Q8IYW2 2715 aa10.04□□□□□ -0.8
HMGN1-220ENST00000492280 FLNCQ14315 2725 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 PKD1L2Q7Z442 2459 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 TNFRSF13BO14836 293 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-220ENST00000492280 CA1P00915 261 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-220ENST00000492280 CD3EP07766 207 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 CD33P20138 364 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 C2orf83Q53S99 150 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 ACTL10Q5JWF8 245 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 PQLC2Q6ZP29 291 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms