RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 AGRNO00468 2067 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 IGKV3-7A0A075B6H7 116 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 IGHV3-49A0A0A0MS15 119 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 TRDV1A0A1B0GX56 115 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 I3L2K1 104 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 SPP1P10451 314 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 DEFB131AP59861 70 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 ARPC4P59998 168 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 LEMD1Q68G75 181 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 MORN3Q6PF18 240 aaPredicted RBP5.91□□□□□ -1.46
USP39-216ENST00000490193 C16orf54Q6UWD8 224 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 ZNF818PQ6ZRF7 136 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 PRSS48Q7RTY5 328 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 STHQ8IWL8 128 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 BEST4Q8NFU0 473 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 BORCS5Q969J3 196 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 GINS3Q9BRX5 216 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 SLC5A7Q9GZV3 580 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 NDUFB11Q9NX14 153 aa5.91□□□□□ -1.46
USP39-216ENST00000490193 RRP15Q9Y3B9 282 aaKnown RBP5.91□□□□□ -1.46
USP39-216ENST00000490193 DEFB131BA0A096LNP1 70 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 NOTOA8MTQ0 251 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 FAM25EA8MYX2 175 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 ST8SIA3O43173 380 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 YIF1AO95070 293 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 CD74P04233 296 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 C4BPBP20851 252 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 F2RP25116 425 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 MFAP4P55083 255 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 ERVK-16P61578 105 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 TBCEQ15813 527 aaPredicted RBP5.9□□□□□ -1.46
USP39-216ENST00000490193 Q6ZR54 194 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 HOGA1Q86XE5 327 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 CENPSQ8N2Z9 138 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 FAM24BQ8N5W8 94 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 ZNF114Q8NC26 417 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 CSNK1G2-AS1Q8NCQ2 148 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 DUSP18Q8NEJ0 188 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 OR51H1Q8NH63 302 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 ST8SIA2Q92186 375 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 GRAMD2BQ96HH9 432 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 TMEM56Q96MV1 263 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 NDUFAF3Q9BU61 184 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 VCXQ9H320 206 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 TMEM14BQ9NUH8 114 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 FKBP11Q9NYL4 201 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 PRNDQ9UKY0 176 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 OR51B2Q9Y5P1 312 aa5.9□□□□□ -1.46
USP39-216ENST00000490193 IGHV3OR16-13A0A075B7E8 117 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 IGHV3-74A0A0B4J1X5 117 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 K7EQG2 157 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 DNASE2O00115 360 aaPredicted RBP5.89□□□□□ -1.47
USP39-216ENST00000490193 SNAPC5O75971 98 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 APOHP02749 345 aaPredicted RBP5.89□□□□□ -1.47
USP39-216ENST00000490193 EIF4EP06730 217 aaKnown RBP5.89□□□□□ -1.47
USP39-216ENST00000490193 PTHLHP12272 177 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 GNRHRP30968 328 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 C12orf74Q32Q52 190 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 AADACL3Q5VUY0 350 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 TOMM20LQ6UXN7 152 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 ZNF367Q7RTV3 350 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 ZNF575Q86XF7 245 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 LILRB2Q8N423 598 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 SLC25A46Q96AG3 418 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 HINT2Q9BX68 163 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 BLOC1S6Q9UL45 172 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 TBC1D24Q9ULP9 559 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 CELA1Q9UNI1 258 aa5.89□□□□□ -1.47
USP39-216ENST00000490193 NACAE9PAV3 2078 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 A0A0A6YYH2 397 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 A6NJ64 397 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 DBX1A6NMT0 343 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 M0R2N4 97 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 GNG7O60262 68 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 CDK2AP2O75956 126 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 MT-CO2P00403 227 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 KRASP01116 189 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 FGF9P31371 208 aaPredicted RBP5.88□□□□□ -1.47
USP39-216ENST00000490193 SCAND1P57086 179 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 FXYD4P59646 89 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 C22orf42Q6IC83 251 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 ZNF600Q6ZNG1 722 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 TPRA1Q86W33 373 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 TMEM17Q86X19 198 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 OR5AP2Q8NGF4 316 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 LGALS14Q8TCE9 139 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 FCAMRQ8WWV6 532 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 MISP3Q96FF7 219 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 FAM210BQ96KR6 192 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 TSC22D3Q99576 134 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 TMEM231Q9H6L2 316 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 FAM212BQ9NTI7 297 aaPredicted RBP5.88□□□□□ -1.47
USP39-216ENST00000490193 RHBDL2Q9NX52 303 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 NSG2Q9Y328 171 aa5.88□□□□□ -1.47
USP39-216ENST00000490193 LRP1BQ9NZR2 4599 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 SMIM30A4D0T7 59 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 PGLYRP1O75594 196 aaPredicted RBP5.87□□□□□ -1.47
USP39-216ENST00000490193 RLN1P04808 185 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 G6PCP35575 357 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 LPAR6P43657 344 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms