RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 CEBPZOSA8MTT3 80 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 MPTX1A8MV57 137 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 I3L2K1 104 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 ZP3P21754 424 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 DEFA5Q01523 94 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 NOXA1Q86UR1 476 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 DTD1Q8TEA8 209 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 CCDC140Q96MF4 163 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 OR5B12Q96R08 314 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 HIPK2Q9H2X6 1198 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 RBKSQ9H477 322 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 U3KQ87 197 aa13.43□□□□□ -0.26
ERCC3-207ENST00000490062 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
ERCC3-207ENST00000490062 A0A087WW49 117 aa13.42□□□□□ -0.26
ERCC3-207ENST00000490062 MFSD2BA6NFX1 497 aa13.42□□□□□ -0.26
ERCC3-207ENST00000490062 SPNP16150 400 aa13.42□□□□□ -0.26
ERCC3-207ENST00000490062 SLC24A4Q8NFF2 622 aa13.42□□□□□ -0.26
ERCC3-207ENST00000490062 DPF1Q92782 380 aa13.42□□□□□ -0.26
ERCC3-207ENST00000490062 OR10C1Q96KK4 312 aa13.42□□□□□ -0.26
ERCC3-207ENST00000490062 CIB3Q96Q77 187 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-207ENST00000490062 HEYLQ9NQ87 328 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-207ENST00000490062 SYNGR2O43760 224 aa13.41□□□□□ -0.26
ERCC3-207ENST00000490062 IAH1Q2TAA2 248 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-207ENST00000490062 ZBTB8BQ8NAP8 495 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-207ENST00000490062 RNASEH2CQ8TDP1 164 aaKnown RBP13.41□□□□□ -0.26
ERCC3-207ENST00000490062 SCARB1Q8WTV0 552 aa13.41□□□□□ -0.26
ERCC3-207ENST00000490062 TMEM170AQ8WVE7 144 aa13.41□□□□□ -0.26
ERCC3-207ENST00000490062 RCC1LQ96I51 464 aaKnown RBP13.41□□□□□ -0.26
ERCC3-207ENST00000490062 DUX3Q96PT4 197 aa13.41□□□□□ -0.26
ERCC3-207ENST00000490062 TXN2Q99757 166 aa13.41□□□□□ -0.26
ERCC3-207ENST00000490062 GAR1Q9NY12 217 aaKnown RBP13.41□□□□□ -0.26
ERCC3-207ENST00000490062 NOTCH3Q9UM47 2321 aa13.4□□□□□ -0.26
ERCC3-207ENST00000490062 F8W735 103 aaPredicted RBP13.4□□□□□ -0.26
ERCC3-207ENST00000490062 BMPR1BO00238 502 aa13.4□□□□□ -0.26
ERCC3-207ENST00000490062 WIPF1O43516 503 aa13.4□□□□□ -0.26
ERCC3-207ENST00000490062 TRBV12-3P01733 135 aa13.4□□□□□ -0.26
ERCC3-207ENST00000490062 NKX2-1P43699 371 aaPredicted RBP13.4□□□□□ -0.26
ERCC3-207ENST00000490062 IL15RAQ13261 267 aa13.4□□□□□ -0.26
ERCC3-207ENST00000490062 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.26
ERCC3-207ENST00000490062 RGS21Q2M5E4 152 aa13.4□□□□□ -0.26
ERCC3-207ENST00000490062 MCRIP2Q9BUT9 160 aaKnown RBP13.4□□□□□ -0.26
ERCC3-207ENST00000490062 C21orf62Q9NYP8 219 aa13.4□□□□□ -0.26
ERCC3-207ENST00000490062 MT-CO2P00403 227 aa13.39□□□□□ -0.27
ERCC3-207ENST00000490062 CD33P20138 364 aa13.39□□□□□ -0.27
ERCC3-207ENST00000490062 NPY1RP25929 384 aa13.39□□□□□ -0.27
ERCC3-207ENST00000490062 HOXD3P31249 432 aaPredicted RBP13.39□□□□□ -0.27
ERCC3-207ENST00000490062 OXA1LQ15070 435 aa13.39□□□□□ -0.27
ERCC3-207ENST00000490062 SPSB3Q6PJ21 355 aa13.39□□□□□ -0.27
ERCC3-207ENST00000490062 C2orf50Q96LR7 162 aa13.39□□□□□ -0.27
ERCC3-207ENST00000490062 ANKRD34BA5PLL1 514 aa13.38□□□□□ -0.27
ERCC3-207ENST00000490062 GGCTO75223 188 aaKnown RBP13.38□□□□□ -0.27
ERCC3-207ENST00000490062 NXPH3O95157 252 aa13.38□□□□□ -0.27
ERCC3-207ENST00000490062 TATDN3Q17R31 274 aa13.38□□□□□ -0.27
ERCC3-207ENST00000490062 GPHB5Q86YW7 130 aa13.38□□□□□ -0.27
ERCC3-207ENST00000490062 DLX4Q92988 240 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-207ENST00000490062 MISP3Q96FF7 219 aa13.38□□□□□ -0.27
ERCC3-207ENST00000490062 BSCL2Q96G97 398 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-207ENST00000490062 GPR61Q9BZJ8 451 aa13.38□□□□□ -0.27
ERCC3-207ENST00000490062 CCSO14618 274 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 CLEC3BP05452 202 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 SLURP1P55000 103 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 MFAP4P55083 255 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 TAS2R30P59541 319 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 SAMD5Q5TGI4 173 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 CLEC19AQ6UXS0 136 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 GSG1LQ6UXU4 331 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 DCUN1D4Q92564 292 aa13.37□□□□□ -0.27
ERCC3-207ENST00000490062 FNDC4Q9H6D8 234 aaPredicted RBP13.37□□□□□ -0.27
ERCC3-207ENST00000490062 RPS10-NUDT3A0A1W2PQS6 291 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 C15orf62A8K5M9 175 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 LGALS9O00182 355 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 OVOL1O14753 267 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 TGOLN2O43493 480 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 IFNA10P01566 189 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 ARL3P36405 182 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 POLR2GP62487 172 aaKnown RBP eCLIP13.36□□□□□ -0.27
ERCC3-207ENST00000490062 RPP30P78346 268 aaKnown RBP13.36□□□□□ -0.27
ERCC3-207ENST00000490062 RPEL1Q2QD12 228 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 C11orf87Q6NUJ2 197 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 C1QL4Q86Z23 238 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 UXS1Q8NBZ7 420 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 SMIM8Q96KF7 97 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 RAB40CQ96S21 281 aa13.36□□□□□ -0.27
ERCC3-207ENST00000490062 RCL1Q9Y2P8 373 aaKnown RBP13.36□□□□□ -0.27
ERCC3-207ENST00000490062 C5orf51A6NDU8 294 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 MBPP02686 304 aaPredicted RBP13.35□□□□□ -0.27
ERCC3-207ENST00000490062 SLC25A4P12235 298 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 NPBWR1P48145 328 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 INSL3P51460 131 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 KPRPQ5T749 579 aaPredicted RBP13.35□□□□□ -0.27
ERCC3-207ENST00000490062 ETFRF1Q6IPR1 90 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 REC114Q7Z4M0 266 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 OR4X1Q8NH49 305 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 ZNF436Q9C0F3 470 aaPredicted RBP13.35□□□□□ -0.27
ERCC3-207ENST00000490062 MAGT1Q9H0U3 335 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 SIGLEC8Q9NYZ4 499 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 S4R3C0 116 aa13.35□□□□□ -0.27
ERCC3-207ENST00000490062 PPP5D1E7EU14 171 aa13.34□□□□□ -0.27
ERCC3-207ENST00000490062 WRBO00258 174 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms