RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ZNF502Q8TBZ5 544 aa15.2■□□□□ 0.02
LIME1-205ENST00000480139 DTD1Q8TEA8 209 aa15.2■□□□□ 0.02
LIME1-205ENST00000480139 CCDC140Q96MF4 163 aa15.2■□□□□ 0.02
LIME1-205ENST00000480139 RBKSQ9H477 322 aa15.2■□□□□ 0.02
LIME1-205ENST00000480139 ANKRD34BA5PLL1 514 aa15.19■□□□□ 0.02
LIME1-205ENST00000480139 MPTX1A8MV57 137 aa15.19■□□□□ 0.02
LIME1-205ENST00000480139 K7EIM0 57 aa15.19■□□□□ 0.02
LIME1-205ENST00000480139 MED6O75586 246 aa15.19■□□□□ 0.02
LIME1-205ENST00000480139 NXPH3O95157 252 aa15.19■□□□□ 0.02
LIME1-205ENST00000480139 OR4D5Q8NGN0 318 aa15.19■□□□□ 0.02
LIME1-205ENST00000480139 RCC1LQ96I51 464 aaKnown RBP15.19■□□□□ 0.02
LIME1-205ENST00000480139 I3L2K1 104 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 LY86O95711 162 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 TRBV12-3P01733 135 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 SPNP16150 400 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 HOXD3P31249 432 aaPredicted RBP15.18■□□□□ 0.02
LIME1-205ENST00000480139 ATP5IP56385 69 aaPredicted RBP15.18■□□□□ 0.02
LIME1-205ENST00000480139 ID3Q02535 119 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 C2orf83Q53S99 150 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 NOXA1Q86UR1 476 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 SLC24A4Q8NFF2 622 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 U3KQ87 197 aa15.18■□□□□ 0.02
LIME1-205ENST00000480139 BMPR1BO00238 502 aa15.17■□□□□ 0.02
LIME1-205ENST00000480139 FCGR2BP31994 310 aaPredicted RBP15.17■□□□□ 0.02
LIME1-205ENST00000480139 IAH1Q2TAA2 248 aaPredicted RBP15.17■□□□□ 0.02
LIME1-205ENST00000480139 SCARB1Q8WTV0 552 aa15.17■□□□□ 0.02
LIME1-205ENST00000480139 MISP3Q96FF7 219 aa15.17■□□□□ 0.02
LIME1-205ENST00000480139 OR10C1Q96KK4 312 aa15.17■□□□□ 0.02
LIME1-205ENST00000480139 CIB3Q96Q77 187 aaPredicted RBP15.17■□□□□ 0.02
LIME1-205ENST00000480139 MCRIP2Q9BUT9 160 aaKnown RBP15.17■□□□□ 0.02
LIME1-205ENST00000480139 C21orf62Q9NYP8 219 aa15.17■□□□□ 0.02
LIME1-205ENST00000480139 SYNGR2O43760 224 aa15.16■□□□□ 0.02
LIME1-205ENST00000480139 SLURP1P55000 103 aa15.16■□□□□ 0.02
LIME1-205ENST00000480139 ZBTB8BQ8NAP8 495 aaPredicted RBP15.16■□□□□ 0.02
LIME1-205ENST00000480139 UXS1Q8NBZ7 420 aa15.16■□□□□ 0.02
LIME1-205ENST00000480139 TXN2Q99757 166 aa15.16■□□□□ 0.02
LIME1-205ENST00000480139 S4R3C0 116 aa15.16■□□□□ 0.02
LIME1-205ENST00000480139 GGCTO75223 188 aaKnown RBP15.15■□□□□ 0.02
LIME1-205ENST00000480139 MT-CO2P00403 227 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 IGHV3-23P01764 117 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 NPY1RP25929 384 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 ARL3P36405 182 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 NKX2-1P43699 371 aaPredicted RBP15.15■□□□□ 0.02
LIME1-205ENST00000480139 KLF5Q13887 457 aaPredicted RBP15.15■□□□□ 0.02
LIME1-205ENST00000480139 RPEL1Q2QD12 228 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 CLEC19AQ6UXS0 136 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 RNASEH2CQ8TDP1 164 aaKnown RBP15.15■□□□□ 0.02
LIME1-205ENST00000480139 TMEM170AQ8WVE7 144 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 DCUN1D4Q92564 292 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 DLX4Q92988 240 aaPredicted RBP15.15■□□□□ 0.02
LIME1-205ENST00000480139 GPR61Q9BZJ8 451 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 GAR1Q9NY12 217 aaKnown RBP15.15■□□□□ 0.02
LIME1-205ENST00000480139 CMYA5Q8N3K9 4069 aa15.15■□□□□ 0.02
LIME1-205ENST00000480139 NBEAL1Q6ZS30 2694 aa15.14■□□□□ 0.01
LIME1-205ENST00000480139 C7orf66A4D0T2 115 aa15.14■□□□□ 0.01
LIME1-205ENST00000480139 CCSO14618 274 aa15.14■□□□□ 0.01
LIME1-205ENST00000480139 OVOL1O14753 267 aa15.14■□□□□ 0.01
LIME1-205ENST00000480139 CLEC3BP05452 202 aa15.14■□□□□ 0.01
LIME1-205ENST00000480139 RGS21Q2M5E4 152 aa15.14■□□□□ 0.01
LIME1-205ENST00000480139 PINX1Q96BK5 328 aaKnown RBP15.14■□□□□ 0.01
LIME1-205ENST00000480139 BSCL2Q96G97 398 aaPredicted RBP15.14■□□□□ 0.01
LIME1-205ENST00000480139 PPP5D1E7EU14 171 aa15.13■□□□□ 0.01
LIME1-205ENST00000480139 F8W735 103 aaPredicted RBP15.13■□□□□ 0.01
LIME1-205ENST00000480139 IFNA10P01566 189 aa15.13■□□□□ 0.01
LIME1-205ENST00000480139 GPR183P32249 361 aa15.13■□□□□ 0.01
LIME1-205ENST00000480139 MFAP4P55083 255 aa15.13■□□□□ 0.01
LIME1-205ENST00000480139 SAMD5Q5TGI4 173 aa15.13■□□□□ 0.01
LIME1-205ENST00000480139 C11orf87Q6NUJ2 197 aa15.13■□□□□ 0.01
LIME1-205ENST00000480139 SPSB3Q6PJ21 355 aa15.13■□□□□ 0.01
LIME1-205ENST00000480139 MAGT1Q9H0U3 335 aa15.13■□□□□ 0.01
LIME1-205ENST00000480139 IGHV3-21A0A0B4J1V1 117 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 RPS10-NUDT3A0A1W2PQS6 291 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 C5orf51A6NDU8 294 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 TGOLN2O43493 480 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 WIPF1O43516 503 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 IGLL1P15814 213 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 OPRK1P41145 380 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 RPP30P78346 268 aaKnown RBP15.12■□□□□ 0.01
LIME1-205ENST00000480139 TATDN3Q17R31 274 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 GSG1LQ6UXU4 331 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 GPHB5Q86YW7 130 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 C1QL4Q86Z23 238 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 C2orf50Q96LR7 162 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 GSKIPQ9P0R6 139 aa15.12■□□□□ 0.01
LIME1-205ENST00000480139 FAM25EA8MYX2 175 aa15.11■□□□□ 0.01
LIME1-205ENST00000480139 WRBO00258 174 aa15.11■□□□□ 0.01
LIME1-205ENST00000480139 IAPPP10997 89 aa15.11■□□□□ 0.01
LIME1-205ENST00000480139 POLR2GP62487 172 aaKnown RBP eCLIP15.11■□□□□ 0.01
LIME1-205ENST00000480139 Q56UQ5 140 aa15.11■□□□□ 0.01
LIME1-205ENST00000480139 FNDC4Q9H6D8 234 aaPredicted RBP15.11■□□□□ 0.01
LIME1-205ENST00000480139 FBN3Q75N90 2809 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 OR2T8A6NH00 312 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 LGALS9O00182 355 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 SLC25A4P12235 298 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 NPBWR1P48145 328 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 INSL3P51460 131 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 SYNJ2BPP57105 145 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 RAB11AP62491 216 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 IL15RAQ13261 267 aa15.1■□□□□ 0.01
LIME1-205ENST00000480139 C9orf66Q5T8R8 295 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms