RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	CCR2	P41597	374 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CXCL12	P48061	93 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ATP5G3	P48201	142 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	GNG4	P50150	75 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF138	P52744	262 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TMBIM6	P55061	237 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	RBM11	P57052	281 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	KLF3	P57682	345 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TPPP2	P59282	170 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	DEFA3	P59666	94 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PFN3	P60673	137 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PCBD1	P61457	104 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	RRAS2	P62070	204 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FKBP1A	P62942	108 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PPP3R1	P63098	170 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ELF3	P78545	371 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PRR3	P79522	188 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	MRPS36	P82909	103 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	RHOG	P84095	191 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TNFAIP6	P98066	277 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	RPL18	Q07020	188 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SLC38A11	Q08AI6	406 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	EIF3I	Q13347	325 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	APOF	Q13790	326 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SPCS2	Q15005	226 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR8B8	Q15620	311 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF141	Q15928	474 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	DEFB116	Q30KQ4	102 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	C12orf74	Q32Q52	190 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	VMA21	Q3ZAQ7	101 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LUZP6	Q538Z0	58 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	HSD17B12	Q53GQ0	312 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LINC00483	Q53H64	154 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	MEST	Q5EB52	335 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	RNASE10	Q5GAN6	216 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PABPC1L2A	Q5JQF8	200 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SPANXN5	Q5MJ07	72 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	C1orf194	Q5T5A4	169 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TMEM78	Q5T7P6	136 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	AADACL3	Q5VUY0	350 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FKBP1C	Q5VVH2	108 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	AMMECR1L	Q6DCA0	310 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LAIR2	Q6ISS4	152 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SFXN4	Q6P4A7	337 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	MORN3	Q6PF18	240 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SLC25A34	Q6PIV7	304 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	RASL11A	Q6T310	242 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF322	Q6U7Q0	402 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TEX261	Q6UWH6	196 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		Q6ZQT7	251 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IDO2	Q6ZQW0	420 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		Q6ZS52	159 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SHISA6	Q6ZSJ9	500 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	MIR17HG	Q75NE6	70 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	NEGR1	Q7Z3B1	354 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LINC00305	Q7Z4B0	112 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FAM19A1	Q7Z5A9	133 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	DAZ4	Q86SG3	579 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LHFPL1	Q86WI0	220 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TEN1	Q86WV5	123 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LRRC28	Q86X40	367 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PHF13	Q86YI8	300 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SAXO1	Q8IYX7	474 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	C8orf59	Q8N0T1	100 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	C1orf158	Q8N1D5	194 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	UMODL1-AS1	Q8N2C9	162 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZCCHC24	Q8N2G6	241 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TMEM86B	Q8N661	226 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TCTEX1D1	Q8N7M0	179 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CYB561D1	Q8N8Q1	229 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TMEM229B	Q8NBD8	167 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	C11orf72	Q8NBR9	251 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LINC00301	Q8NCQ3	95 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	NUP35	Q8NFH5	326 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	NPB	Q8NG41	125 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR2M7	Q8NG81	312 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR4S1	Q8NGB4	309 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR10P1	Q8NGE3	313 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR5A2	Q8NGI9	324 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR13C4	Q8NGS5	318 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR2T4	Q8NH00	348 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CLDND2	Q8NHS1	167 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FNDC9	Q8TBE3	224 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TMEM254	Q8TBM7	123 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FAM57A	Q8TBR7	257 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	RPS4Y2	Q8TD47	263 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	C4orf3	Q8WVX3	66 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ITLN2	Q8WWU7	325 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PSMF1	Q92530	271 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	KLK6	Q92876	244 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FGF13	Q92913	245 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SLC25A46	Q96AG3	418 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PLEKHB2	Q96CS7	222 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FXYD5	Q96DB9	178 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SLAMF6	Q96DU3	332 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PRELID3A	Q96N28	172 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CCDC115	Q96NT0	180 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR52B2	Q96RD2	323 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TP53RK	Q96S44	253 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	C12orf57	Q99622	126 aa		0.49	□□□□□ -2.33

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