RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 ZNF502Q8TBZ5 544 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 DLX4Q92988 240 aaPredicted RBP14.14□□□□□ -0.15
HOXA9-203ENST00000465941 MCRIP2Q9BUT9 160 aaKnown RBP14.14□□□□□ -0.15
HOXA9-203ENST00000465941 HIPK2Q9H2X6 1198 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 RBKSQ9H477 322 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 WNK1Q9H4A3 2382 aa14.14□□□□□ -0.15
HOXA9-203ENST00000465941 I3L2K1 104 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 BMPR1BO00238 502 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 IGHV3-23P01764 117 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 IGLL1P15814 213 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 KLF5Q13887 457 aaPredicted RBP14.13□□□□□ -0.15
HOXA9-203ENST00000465941 C12orf45Q8N5I9 185 aaPredicted RBP14.13□□□□□ -0.15
HOXA9-203ENST00000465941 DTD1Q8TEA8 209 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 SCARB1Q8WTV0 552 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 DCUN1D4Q92564 292 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 MISP3Q96FF7 219 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 ATP6V0BQ99437 205 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 S4R3C0 116 aa14.13□□□□□ -0.15
HOXA9-203ENST00000465941 CORTO00230 105 aa14.12□□□□□ -0.15
HOXA9-203ENST00000465941 PRAF2O60831 178 aa14.12□□□□□ -0.15
HOXA9-203ENST00000465941 MED6O75586 246 aa14.12□□□□□ -0.15
HOXA9-203ENST00000465941 CLEC3BP05452 202 aa14.12□□□□□ -0.15
HOXA9-203ENST00000465941 ID3Q02535 119 aa14.12□□□□□ -0.15
HOXA9-203ENST00000465941 C2orf83Q53S99 150 aa14.12□□□□□ -0.15
HOXA9-203ENST00000465941 CLEC19AQ6UXS0 136 aa14.12□□□□□ -0.15
HOXA9-203ENST00000465941 GPN1Q9HCN4 374 aaPredicted RBP14.12□□□□□ -0.15
HOXA9-203ENST00000465941 U3KQ87 197 aa14.12□□□□□ -0.15
HOXA9-203ENST00000465941 SNRPGP15A8MWD9 76 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 OVOL1O14753 267 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 GGCTO75223 188 aaKnown RBP14.11□□□□□ -0.15
HOXA9-203ENST00000465941 PTTG1O95997 202 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 RPEL1Q2QD12 228 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 OXLD1Q5BKU9 147 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 SAMD5Q5TGI4 173 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 UXS1Q8NBZ7 420 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 SLC24A4Q8NFF2 622 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 OR4D5Q8NGN0 318 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 OR10C1Q96KK4 312 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 C21orf62Q9NYP8 219 aa14.11□□□□□ -0.15
HOXA9-203ENST00000465941 PPP5D1E7EU14 171 aa14.1□□□□□ -0.15
HOXA9-203ENST00000465941 G3V4G9 280 aa14.1□□□□□ -0.15
HOXA9-203ENST00000465941 MT-CO2P00403 227 aa14.1□□□□□ -0.15
HOXA9-203ENST00000465941 FCGR2BP31994 310 aaPredicted RBP14.1□□□□□ -0.15
HOXA9-203ENST00000465941 ARL3P36405 182 aa14.1□□□□□ -0.15
HOXA9-203ENST00000465941 ATP5IP56385 69 aaPredicted RBP14.1□□□□□ -0.15
HOXA9-203ENST00000465941 IAH1Q2TAA2 248 aaPredicted RBP14.1□□□□□ -0.15
HOXA9-203ENST00000465941 NOXA1Q86UR1 476 aa14.1□□□□□ -0.15
HOXA9-203ENST00000465941 PINX1Q96BK5 328 aaKnown RBP14.1□□□□□ -0.15
HOXA9-203ENST00000465941 TXN2Q99757 166 aa14.1□□□□□ -0.15
HOXA9-203ENST00000465941 GPR61Q9BZJ8 451 aa14.1□□□□□ -0.15
HOXA9-203ENST00000465941 IGHV3-21A0A0B4J1V1 117 aa14.09□□□□□ -0.15
HOXA9-203ENST00000465941 F8W735 103 aaPredicted RBP14.09□□□□□ -0.15
HOXA9-203ENST00000465941 SYNGR2O43760 224 aa14.09□□□□□ -0.15
HOXA9-203ENST00000465941 SPNP16150 400 aa14.09□□□□□ -0.15
HOXA9-203ENST00000465941 TATDN3Q17R31 274 aa14.09□□□□□ -0.15
HOXA9-203ENST00000465941 C11orf87Q6NUJ2 197 aa14.09□□□□□ -0.15
HOXA9-203ENST00000465941 GPHB5Q86YW7 130 aa14.09□□□□□ -0.15
HOXA9-203ENST00000465941 RNASEH2CQ8TDP1 164 aaKnown RBP14.09□□□□□ -0.15
HOXA9-203ENST00000465941 TMEM170AQ8WVE7 144 aa14.09□□□□□ -0.15
HOXA9-203ENST00000465941 BSCL2Q96G97 398 aaPredicted RBP14.09□□□□□ -0.15
HOXA9-203ENST00000465941 CIB3Q96Q77 187 aaPredicted RBP14.09□□□□□ -0.15
HOXA9-203ENST00000465941 GAR1Q9NY12 217 aaKnown RBP14.09□□□□□ -0.15
HOXA9-203ENST00000465941 OR2C1O95371 312 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 LY86O95711 162 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 IFNA10P01566 189 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 NPY1RP25929 384 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 GPR183P32249 361 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 MFAP4P55083 255 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 SYNJ2BPP57105 145 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 DCTN2Q13561 401 aaKnown RBP14.08□□□□□ -0.16
HOXA9-203ENST00000465941 ACSM6Q6P461 480 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 SPSB3Q6PJ21 355 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 C1QL4Q86Z23 238 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 ZBTB8BQ8NAP8 495 aaPredicted RBP14.08□□□□□ -0.16
HOXA9-203ENST00000465941 MAGT1Q9H0U3 335 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 MGAM2Q2M2H8 2515 aa14.08□□□□□ -0.16
HOXA9-203ENST00000465941 OR2T8A6NH00 312 aa14.07□□□□□ -0.16
HOXA9-203ENST00000465941 SEC14L6B5MCN3 397 aa14.07□□□□□ -0.16
HOXA9-203ENST00000465941 CCSO14618 274 aa14.07□□□□□ -0.16
HOXA9-203ENST00000465941 TGOLN2O43493 480 aa14.07□□□□□ -0.16
HOXA9-203ENST00000465941 WIPF1O43516 503 aa14.07□□□□□ -0.16
HOXA9-203ENST00000465941 NKX2-1P43699 371 aaPredicted RBP14.07□□□□□ -0.16
HOXA9-203ENST00000465941 KPRPQ5T749 579 aaPredicted RBP14.07□□□□□ -0.16
HOXA9-203ENST00000465941 C9orf66Q5T8R8 295 aa14.07□□□□□ -0.16
HOXA9-203ENST00000465941 OR9G4Q8NGQ1 327 aa14.07□□□□□ -0.16
HOXA9-203ENST00000465941 FNDC4Q9H6D8 234 aaPredicted RBP14.07□□□□□ -0.16
HOXA9-203ENST00000465941 GSKIPQ9P0R6 139 aa14.07□□□□□ -0.16
HOXA9-203ENST00000465941 LGALS9O00182 355 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 IGHV3-48P01763 117 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 CTSGP08311 255 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 IAPPP10997 89 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 OPRK1P41145 380 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 INSL3P51460 131 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 POLR2GP62487 172 aaKnown RBP eCLIP14.06□□□□□ -0.16
HOXA9-203ENST00000465941 Q56UQ5 140 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 UBAC2Q8NBM4 344 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 C2orf50Q96LR7 162 aa14.06□□□□□ -0.16
HOXA9-203ENST00000465941 RPS10-NUDT3A0A1W2PQS6 291 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 C5orf51A6NDU8 294 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 FAM25EA8MYX2 175 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms