RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 GGTLC1Q9BX51 225 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 NXF2Q9GZY0 626 aaKnown RBP5.44□□□□□ -1.54
PTPRF-210ENST00000463041 WFDC10AQ9H1F0 79 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 MIXL1Q9H2W2 232 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 SMPXQ9UHP9 88 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 SELENOKQ9Y6D0 94 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 PLECQ15149 4684 aaKnown RBP5.44□□□□□ -1.54
PTPRF-210ENST00000463041 DNAH1Q9P2D7 4330 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 TRAV14DV4A0A0A6YYC5 116 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 TEX13DA0A0J9YY54 714 aaPredicted RBP5.43□□□□□ -1.54
PTPRF-210ENST00000463041 OR4C46A6NHA9 309 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 DISC1C4P0D8 188 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 CORTO00230 105 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 UBE2CO00762 179 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 GNG7O60262 68 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 YIF1AO95070 293 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 CDS2O95674 445 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 MT-CO2P00403 227 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 IFNA17P01571 189 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 IGKV1-5P01602 117 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 CD5P06127 495 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 CTSDP07339 412 aaPredicted RBP5.43□□□□□ -1.54
PTPRF-210ENST00000463041 P0C879 139 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 UCP1P25874 307 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 NPBWR1P48145 328 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 TMBIM6P55061 237 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 SURF2Q15527 256 aaPredicted RBP5.43□□□□□ -1.54
PTPRF-210ENST00000463041 IZUMO4Q1ZYL8 232 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 TRIM16LQ309B1 348 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 SP6Q3SY56 376 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 SCGB2B2Q4G0G5 96 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 PVRIGQ6DKI7 326 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 DUSP18Q8NEJ0 188 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 MARCH1Q8TCQ1 289 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 RAB2BQ8WUD1 216 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 OR10C1Q96KK4 312 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 PDCD10Q9BUL8 212 aa5.43□□□□□ -1.54
PTPRF-210ENST00000463041 KIR2DL5BA0A0G2JN68 375 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 KIR2DL5BA0A0G2JPC4 375 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 IGHV7-4-1A0A0J9YVY3 117 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 LCE6AA0A183 80 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 CHEK1O14757 476 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 ST8SIA3O43173 380 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 ZNF207O43670 478 aaKnown RBP5.42□□□□□ -1.54
PTPRF-210ENST00000463041 TMEM50AO95807 157 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 AKAIN1P0CW23 69 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 BMI1P35226 326 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 ETV6P41212 452 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 RPL5P46777 297 aaKnown RBP5.42□□□□□ -1.54
PTPRF-210ENST00000463041 AKR1C2P52895 323 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 APOC4P55056 127 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 PAFAH1B2P68402 229 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 DHODHQ02127 395 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 SPCS2Q15005 226 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 Q6ZWC4 215 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 WFDC3Q8IUB2 231 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 CLVS1Q8IUQ0 354 aaPredicted RBP5.42□□□□□ -1.54
PTPRF-210ENST00000463041 FAM219AQ8IW50 185 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 KIR2DL5AQ8N109 375 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 SLC35G3Q8N808 338 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 TMEM116Q8NCL8 245 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 OR4D10Q8NGI6 311 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 OR13C8Q8NGS7 320 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 OR52E5Q8NH55 327 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 KIR2DL5BQ8NHK3 375 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 DYNC2LI1Q8TCX1 351 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 GLYATL2Q8WU03 294 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 SMIM4Q8WVI0 70 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 PINX1Q96BK5 328 aaKnown RBP5.42□□□□□ -1.54
PTPRF-210ENST00000463041 DIRAS2Q96HU8 199 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 SCGB3A2Q96PL1 93 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 OVOL2Q9BRP0 275 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 GINS3Q9BRX5 216 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 RTBDNQ9BSG5 229 aaPredicted RBP5.42□□□□□ -1.54
PTPRF-210ENST00000463041 RHPN1-AS1Q9BWJ2 59 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 TMEM222Q9H0R3 208 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 RETNQ9HD89 108 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 ENY2Q9NPA8 101 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.42□□□□□ -1.54
PTPRF-210ENST00000463041 CACFD1Q9UGQ2 172 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 RSL24D1Q9UHA3 163 aaKnown RBP5.42□□□□□ -1.54
PTPRF-210ENST00000463041 GPR132Q9UNW8 380 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 C14orf166Q9Y224 244 aaKnown RBP5.42□□□□□ -1.54
PTPRF-210ENST00000463041 TP53TG1Q9Y2A0 90 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 KCNIP3Q9Y2W7 256 aa5.42□□□□□ -1.54
PTPRF-210ENST00000463041 AGRNO00468 2067 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 IGHV3OR16-8A0A075B7F1 116 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 GSTZ1O43708 216 aaPredicted RBP5.41□□□□□ -1.54
PTPRF-210ENST00000463041 IGHV3-48P01763 117 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 RNASE2P10153 161 aaKnown RBP5.41□□□□□ -1.54
PTPRF-210ENST00000463041 PPP5CP53041 499 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 SPCS3P61009 180 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 IL18Q14116 193 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 AARDQ4LEZ3 155 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 FAM90A2PQ658T7 463 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 TOMM20LQ6UXN7 152 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 ZNF600Q6ZNG1 722 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 Q6ZRM9 215 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 SELENOHQ8IZQ5 122 aaKnown RBP5.41□□□□□ -1.54
PTPRF-210ENST00000463041 STPG3Q8N7X2 389 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms