RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 PQLC2Q6ZP29 291 aa13.75□□□□□ -0.21
ACTB-207ENST00000462494 OR5AN1Q8NGI8 311 aa13.75□□□□□ -0.21
ACTB-207ENST00000462494 PIEZO2Q9H5I5 2752 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 NDUFB3O43676 98 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 NUPR1O60356 82 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 IGHV3-48P01763 117 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 ATP5IP56385 69 aaPredicted RBP13.74□□□□□ -0.21
ACTB-207ENST00000462494 SUMO1P63165 101 aaKnown RBP13.74□□□□□ -0.21
ACTB-207ENST00000462494 TCF15Q12870 199 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 GFRALQ6UXV0 394 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 ZNF664Q8N3J9 261 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 PKDREJQ9NTG1 2253 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 DLL1O00548 723 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 OR5G3P0C626 314 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 RPEL1Q2QD12 228 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 LRRC10Q5BKY1 277 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 C10orf55Q5SWW7 151 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 DMXL2Q8TDJ6 3036 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 TMEM106BQ9NUM4 274 aa13.74□□□□□ -0.21
ACTB-207ENST00000462494 ACACAQ13085 2346 aa13.73□□□□□ -0.21
ACTB-207ENST00000462494 YPEL3P61236 119 aaPredicted RBP13.73□□□□□ -0.21
ACTB-207ENST00000462494 SSBP2P81877 361 aaPredicted RBP13.73□□□□□ -0.21
ACTB-207ENST00000462494 TMEM177Q53S58 311 aa13.73□□□□□ -0.21
ACTB-207ENST00000462494 OR4C13Q8NGP0 309 aa13.73□□□□□ -0.21
ACTB-207ENST00000462494 OR1L6Q8NGR2 347 aa13.73□□□□□ -0.21
ACTB-207ENST00000462494 LY96Q9Y6Y9 160 aa13.73□□□□□ -0.21
ACTB-207ENST00000462494 DCHS1Q96JQ0 3298 aa13.73□□□□□ -0.21
ACTB-207ENST00000462494 TRAV5A0A0B4J249 113 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 GGTLC3B5MD39 225 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 C8orf88P0DMB2 117 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 USF1P22415 310 aaPredicted RBP13.72□□□□□ -0.21
ACTB-207ENST00000462494 TDGF1P3P51864 188 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 REC114Q7Z4M0 266 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 MMD2Q8IY49 270 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 MRPL18Q9H0U6 180 aaKnown RBP13.72□□□□□ -0.21
ACTB-207ENST00000462494 RNASE7Q9H1E1 156 aaKnown RBP13.72□□□□□ -0.21
ACTB-207ENST00000462494 ARL2-SNX15V9GYD0 113 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 SPINK4O60575 86 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 SCGB1D1O95968 90 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 FRMD6-AS1P0C7T7 363 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 IER3P46695 156 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 MORN5Q5VZ52 161 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 SLC25A33Q9BSK2 321 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 C19orf24Q9BVV8 132 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 V9GYV3 84 aa13.72□□□□□ -0.21
ACTB-207ENST00000462494 FCN1O00602 326 aa13.71□□□□□ -0.21
ACTB-207ENST00000462494 LGALS4P56470 323 aa13.71□□□□□ -0.21
ACTB-207ENST00000462494 WT1-ASQ06250 92 aa13.71□□□□□ -0.21
ACTB-207ENST00000462494 FXYD3Q14802 87 aa13.71□□□□□ -0.21
ACTB-207ENST00000462494 CACNG8Q8WXS5 425 aa13.71□□□□□ -0.21
ACTB-207ENST00000462494 DYNLRB1Q9NP97 96 aa13.71□□□□□ -0.21
ACTB-207ENST00000462494 CTSZQ9UBR2 303 aa13.71□□□□□ -0.21
ACTB-207ENST00000462494 A0A1W2PN81 502 aa13.71□□□□□ -0.22
ACTB-207ENST00000462494 TIGITQ495A1 244 aa13.71□□□□□ -0.22
ACTB-207ENST00000462494 ZNF430Q9H8G1 570 aaPredicted RBP13.71□□□□□ -0.22
ACTB-207ENST00000462494 ENSAO43768 121 aaKnown RBP13.7□□□□□ -0.22
ACTB-207ENST00000462494 REG1AP05451 166 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 MGST1P10620 155 aaKnown RBP13.7□□□□□ -0.22
ACTB-207ENST00000462494 UBE2L3P68036 154 aaKnown RBP13.7□□□□□ -0.22
ACTB-207ENST00000462494 IQCJQ1A5X6 159 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 PDPNQ86YL7 162 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 PNKDQ8N490 385 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 LINC00469Q8N7U9 141 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 VSTM2AQ8TAG5 236 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 CMTM2Q8TAZ6 248 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 TMEM167AQ8TBQ9 72 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 NPIPB3Q92617 1050 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 TMEM186Q96B77 213 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 SLC25A2Q9BXI2 301 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 SPTBN2O15020 2390 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 TRAV9-1A0A075B6T8 112 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 CGB1A6NKQ9 187 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 VSTM5A8MXK1 200 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 SNURFLB1AK76 121 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 SLC25A17O43808 307 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 TGIF2LXQ8IUE1 241 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 Q8NA96 180 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 OR5AU1Q8NGC0 362 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 RNASE6Q93091 150 aaKnown RBP13.7□□□□□ -0.22
ACTB-207ENST00000462494 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
ACTB-207ENST00000462494 WASHC3Q9Y3C0 194 aa13.7□□□□□ -0.22
ACTB-207ENST00000462494 IGHV3-72A0A0B4J1Y9 119 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 A8MWP6 167 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 COX7A2P2O60397 106 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 CRISP2P16562 243 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 TCL1AP56279 114 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 SLC35B1P78383 322 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 RITA1Q96K30 269 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 MS4A10Q96PG2 267 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 TPSG1Q9NRR2 321 aa13.69□□□□□ -0.22
ACTB-207ENST00000462494 A0A1W2PRE2 83 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 IGLV2-23P01705 113 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 SNRPCP09234 159 aaKnown RBP13.68□□□□□ -0.22
ACTB-207ENST00000462494 LOXP28300 417 aaPredicted RBP13.68□□□□□ -0.22
ACTB-207ENST00000462494 NHLRC2Q8NBF2 726 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 PRSS33Q8NF86 280 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 NOL4LQ96MY1 436 aaPredicted RBP13.68□□□□□ -0.22
ACTB-207ENST00000462494 MRPL32Q9BYC8 188 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms