RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 ADAP1O75689 374 aa8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 HOXD3P31249 432 aaPredicted RBP8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 HTR2BP41595 481 aa8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 MFAP2P55001 183 aa8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 BSXQ3C1V8 233 aa8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 NOXA1Q86UR1 476 aa8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 DTD1Q8TEA8 209 aa8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 SEC22CQ9BRL7 303 aa8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 MARVELD1Q9BSK0 173 aa8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 GPN1Q9HCN4 374 aaPredicted RBP8.98□□□□□ -0.97
TRAF3IP1-204ENST00000462122 INMT-MINDY4F8WBC2 141 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 K7EIM0 57 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 MED6O75586 246 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 NXPH3O95157 252 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 LY86O95711 162 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 PTTG1O95997 202 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 TRBV12-3P01733 135 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 RNASE2P10153 161 aaKnown RBP8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 SLURP1P55000 103 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 ATP5IP56385 69 aaPredicted RBP8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 PVRIGQ6DKI7 326 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 C12orf45Q8N5I9 185 aaPredicted RBP8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 SLC24A4Q8NFF2 622 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 ZNF502Q8TBZ5 544 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 MISP3Q96FF7 219 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 CCDC140Q96MF4 163 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 RBKSQ9H477 322 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 GAR1Q9NY12 217 aaKnown RBP8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 C21orf62Q9NYP8 219 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 U3KQ87 197 aa8.97□□□□□ -0.97
TRAF3IP1-204ENST00000462122 DNAH3Q8TD57 4116 aa8.96□□□□□ -0.97
TRAF3IP1-204ENST00000462122 SNRPGP15A8MWD9 76 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 BMPR1BO00238 502 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 OVOL1O14753 267 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 GGCTO75223 188 aaKnown RBP8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 MT-CO2P00403 227 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 IGHV3-23P01764 117 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 FCGR2BP31994 310 aaPredicted RBP8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 ARL3P36405 182 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 TATDN3Q17R31 274 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 RPEL1Q2QD12 228 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 C2orf83Q53S99 150 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 SAMD5Q5TGI4 173 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 CLEC19AQ6UXS0 136 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 SCARB1Q8WTV0 552 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 DCUN1D4Q92564 292 aa8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 DLX4Q92988 240 aaPredicted RBP8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 CIB3Q96Q77 187 aaPredicted RBP8.96□□□□□ -0.98
TRAF3IP1-204ENST00000462122 MPTX1A8MV57 137 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 I3L2K1 104 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 SYNGR2O43760 224 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 CLEC3BP05452 202 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 IGLL1P15814 213 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 NPY1RP25929 384 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 GPR183P32249 361 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 NKX2-1P43699 371 aaPredicted RBP8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 DCTN2Q13561 401 aaKnown RBP8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 KLF5Q13887 457 aaPredicted RBP8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 IAH1Q2TAA2 248 aaPredicted RBP8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 SPSB3Q6PJ21 355 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 C1QL4Q86Z23 238 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 UXS1Q8NBZ7 420 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 OR4D5Q8NGN0 318 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 RNASEH2CQ8TDP1 164 aaKnown RBP8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 PINX1Q96BK5 328 aaKnown RBP8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 BSCL2Q96G97 398 aaPredicted RBP8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 TXN2Q99757 166 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 S4R3C0 116 aa8.95□□□□□ -0.98
TRAF3IP1-204ENST00000462122 IGHV3-21A0A0B4J1V1 117 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 RPS10-NUDT3A0A1W2PQS6 291 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 SEC14L6B5MCN3 397 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 PPP5D1E7EU14 171 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 G3V4G9 280 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 WRBO00258 174 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 TGOLN2O43493 480 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 IFNA10P01566 189 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 OPRK1P41145 380 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 NPBWR1P48145 328 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 INSL3P51460 131 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 MFAP4P55083 255 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 RPP30P78346 268 aaKnown RBP8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 ID3Q02535 119 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 Q56UQ5 140 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 OXLD1Q5BKU9 147 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 C9orf66Q5T8R8 295 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 ZBTB8BQ8NAP8 495 aaPredicted RBP8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 OR10C1Q96KK4 312 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 ELOVL1Q9BW60 279 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 NOTCH3Q9UM47 2321 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 NOTCH1P46531 2555 aa8.94□□□□□ -0.98
TRAF3IP1-204ENST00000462122 C5orf51A6NDU8 294 aa8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 FAM25EA8MYX2 175 aa8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 F8W735 103 aaPredicted RBP8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 CCSO14618 274 aa8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 WIPF1O43516 503 aa8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 SCGB2A1O75556 95 aa8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 IAPPP10997 89 aa8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 SYNJ2BPP57105 145 aa8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 RAB11AP62491 216 aa8.93□□□□□ -0.98
TRAF3IP1-204ENST00000462122 ETFRF1Q6IPR1 90 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms