RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 HLA-GP17693 338 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 CXCL3P19876 107 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 PMCHP20382 165 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 NFYBP25208 207 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 DSCR9P59020 149 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 GNB2P62879 340 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 TMEM187Q14656 261 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 SLC9A3R2Q15599 337 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 MSMO1Q15800 293 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 SP6Q3SY56 376 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 SGPP2Q8IWX5 399 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 CMTM1Q8IZ96 169 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 SELENOHQ8IZQ5 122 aaKnown RBP4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 DRAM1Q8N682 238 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 C8orf31Q8N9H6 132 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 CCDC71LQ8N9Z2 235 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF439Q8NDP4 499 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR11H7Q8NGC8 314 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 CLDND2Q8NHS1 167 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 CASTOR1Q8WTX7 329 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 RTN4IP1Q8WWV3 396 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 LEAP2Q969E1 77 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 GALNT14Q96FL9 552 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 ST6GAL2Q96JF0 529 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF747Q9BV97 191 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 BPESC1Q9GZL8 116 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 NAA60Q9H7X0 242 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 ESM1Q9NQ30 184 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 SHPKQ9UHJ6 478 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 PSG11Q9UQ72 335 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 KCNIP3Q9Y2W7 256 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 RBM7Q9Y580 266 aaKnown RBP4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 CSMD1Q96PZ7 3565 aa4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 SETXQ7Z333 2677 aaKnown RBP4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 SONP18583 2426 aaKnown RBP4.12□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGHV4-30-2A0A087WSY4 118 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGHV4-61A0A0C4DH41 118 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGHV2-70DA0A0C4DH43 119 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 C3orf85A0A1B0GTC6 90 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 FCN1O00602 326 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 SLC31A2O15432 143 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 PLXNB1O43157 2135 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR2A4O95047 310 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGHV4-59P01825 116 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 RBP4P02753 201 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGHV1-8P0DP01 117 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGHV4-38-2P0DP08 117 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 F2RP25116 425 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 CD34P28906 385 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 S100GP29377 79 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 RAB7AP51149 207 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 XGP55808 180 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 S100A12P80511 92 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 PAX2Q02962 417 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 EIF4EBP1Q13541 118 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 LAGE3Q14657 143 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 SLC25A48Q6ZT89 311 aaKnown RBP4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 LINC00311Q8N616 119 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF645Q8N7E2 425 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 Q8N7P7 452 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 TNFRSF14Q92956 283 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 ABHD14BQ96IU4 210 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR2A7Q96R45 310 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 TP53RKQ96S44 253 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 PHB2Q99623 299 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 ATP5SQ99766 215 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 OVOL2Q9BRP0 275 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 SUCNR1Q9BXA5 334 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF436Q9C0F3 470 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 TMEM222Q9H0R3 208 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR2D2Q9H210 308 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 TMEM133Q9H2Q1 129 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 IFI27L2Q9H2X8 130 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 SDHAF2Q9NX18 166 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 CELSR1Q9NYQ6 3014 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 NAV3Q8IVL0 2385 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 AKAP9Q99996 3911 aa4.11□□□□□ -1.75
HMGB1P4-201ENST00000455362 BAHCC1Q9P281 2608 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 MTORP42345 2549 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 TRBV7-9A0A0J9YWB2 115 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 RNF212BA8MTL3 300 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 A8MXK9 166 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 LINC00587B1AMM8 73 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 H0Y980 276 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 M0R1W7 72 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 GOSR2O14653 212 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 TNFSF12O43508 249 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 CHST1O43916 411 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 FOXH1O75593 365 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 ADAP1O75689 374 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 SIX6O95475 246 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 CDS2O95674 445 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR5AC1P0C628 307 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 PRTN3P24158 256 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 H2BFSP57053 126 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 LINC00205P59089 165 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 KRTAP10-2P60368 255 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 ARF6P62330 175 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 RPL30P62888 115 aaKnown RBP4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 SRSF4Q08170 494 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms